Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01132 ATGAACACGAACTGCGACTTGGAACTCCGCCTAGATCTTCCTCCATTTCCAGACAAGGATCATCATCAGCAACACCCCAGCACCACCCACTACGGCCAATCCTCGGTGGATGATGTGAATAATGGAAATCCGAAACAACGAGTGCATCAGCAGGAGAAGAAGCTAACCCTAGTCTACGATGGAAACATCTGTGTATCCGATGTTACAGAGCTTCAGGCTAGAGCTATATTGATTCTTGCAAGAAGAGAAATGGATATGGCTAGAGCTCAAAGGACTGAACCATCTTCTCCAACATTGGAATCTCATACTAACCGATGGTGTAACCCAAGCACCGGCCTTTCAATGAAAAGATCTCTGCAAAGGTTCCTACAAAAGAGAAAGAATAGGGTTCAAGATGCATCTCCATACTAG 411 0.4526 MNTNCDLELRLDLPPFPDKDHHQQHPSTTHYGQSSVDDVNNGNPKQRVHQQEKKLTLVYDGNICVSDVTELQARAILILARREMDMARAQRTEPSSPTLESHTNRWCNPSTGLSMKRSLQRFLQKRKNRVQDASPY* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01132 136 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 33 136 IPR040390 -
Pte19g01132 136 MobiDBLite consensus disorder prediction 88 112 - -
Pte19g01132 136 MobiDBLite consensus disorder prediction 91 112 - -
Pte19g01132 136 MobiDBLite consensus disorder prediction 1 49 - -
Pte19g01132 136 MobiDBLite consensus disorder prediction 27 46 - -
Pte19g01132 136 ProSiteProfiles Tify domain profile. 48 82 IPR010399 -
Pte19g01132 136 MobiDBLite consensus disorder prediction 12 26 - -
Pte19g01132 136 Pfam Jas motif 116 136 IPR018467 -
Pte19g01132 136 Pfam tify domain 50 80 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01132 Pte-Chr19 13896284 13898025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01132 4 136 Tify Gene Family AT1G30135 40.741 1.72e-23 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte19g01132 Jas_motif 6.7e-10 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01132 - - rcu:8264090 124.02