Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01110 ATGAAGGACTCGGGGGTTCAAAAGGGTAGCTACTCAAACGCTGATGCCTTGGTCATTTTTGTCTGCAAGAAAGGGCAACTTCGTAAAAACCGTGAAATACCTGCACAAGCTCACGGACCGGCCATATCAGGAGATGATGTGTGTGTGGTGTCAGGTACAACTTCTTCATCCGCTTCTGGGTTTACTAACGGGGTTTGTGGTATGCAAGGTGTTCTATTGAGCTCCAAGTTTCTGAAAACTGCACAGGAATTGTTAGATGAAGTTATCAATATTAAGAATCAGAATTTCGCTTCCAAGATTGAACTGGTTAAGAAGACCAATCTACAGAACAAGGAGATGGGCGAGTCATCTACAAATGCTAGTGGCGACAGTTCCACTGGTGTGGAGGTGAGCTTGAAGCATGGCAATGAGCTATCAACTGCAGAGAAGCAGGAAATTCAAATGAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTTTGGACCTGGGAATCTTTTGGACGAAGAGGTACCTTTGCTTTTAGAGACGCACCATAG 537 0.4432 MKDSGVQKGSYSNADALVIFVCKKGQLRKNREIPAQAHGPAISGDDVCVVSGTTSSSASGFTNGVCGMQGVLLSSKFLKTAQELLDEVINIKNQNFASKIELVKKTNLQNKEMGESSTNASGDSSTGVEVSLKHGNELSTAEKQEIQMKKAKLINMLDEVWTWESFGRRGTFAFRDAP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01110 178 MobiDBLite consensus disorder prediction 111 131 - -
Pte19g01110 178 Pfam Associated with HOX 71 160 IPR006563 -
Pte19g01110 178 SMART prehox3 66 176 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01110 Pte-Chr19 12060059 12061439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01110 44 160 Homeobox Transcription Factor Family AT2G35940 46.281 8.58e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01110 - - qsa:O6P43_006028 146.747