LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte19g01110	ATGAAGGACTCGGGGGTTCAAAAGGGTAGCTACTCAAACGCTGATGCCTTGGTCATTTTTGTCTGCAAGAAAGGGCAACTTCGTAAAAACCGTGAAATACCTGCACAAGCTCACGGACCGGCCATATCAGGAGATGATGTGTGTGTGGTGTCAGGTACAACTTCTTCATCCGCTTCTGGGTTTACTAACGGGGTTTGTGGTATGCAAGGTGTTCTATTGAGCTCCAAGTTTCTGAAAACTGCACAGGAATTGTTAGATGAAGTTATCAATATTAAGAATCAGAATTTCGCTTCCAAGATTGAACTGGTTAAGAAGACCAATCTACAGAACAAGGAGATGGGCGAGTCATCTACAAATGCTAGTGGCGACAGTTCCACTGGTGTGGAGGTGAGCTTGAAGCATGGCAATGAGCTATCAACTGCAGAGAAGCAGGAAATTCAAATGAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTTTGGACCTGGGAATCTTTTGGACGAAGAGGTACCTTTGCTTTTAGAGACGCACCATAG	537	0.4432	MKDSGVQKGSYSNADALVIFVCKKGQLRKNREIPAQAHGPAISGDDVCVVSGTTSSSASGFTNGVCGMQGVLLSSKFLKTAQELLDEVINIKNQNFASKIELVKKTNLQNKEMGESSTNASGDSSTGVEVSLKHGNELSTAEKQEIQMKKAKLINMLDEVWTWESFGRRGTFAFRDAP*	179

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte19g01110	178	MobiDBLite	consensus disorder prediction	111	131	-	-
	Pte19g01110	178	Pfam	Associated with HOX	71	160	IPR006563	-
	Pte19g01110	178	SMART	prehox3	66	176	IPR006563	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte19g01110	Pte-Chr19	12060059	12061439	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte19g01110	44	160	Homeobox Transcription Factor Family	AT2G35940	46.281	8.58e-16	72.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte19g01110	-		-	qsa:O6P43_006028	146.747

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