Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01107 ATGAATTGTGAAAACTATGATCCCTCCTTTCCGGACCAACCTGTGGTCGATCTTTACCTACCTGTTTGGGCTAATCTGCCTGCCTTTCAGTCTAAACCTGTGTTCATTTGGGCTGAAGATGGGGGCGAAGAATCAGCCAATTCAATCAAGACCACCATGCTCACCTATATCCAGCTCAATGATTCCGTGCAGGCCATTGCTTCTCATCTAACAACCCAGTTCCAAAGAGGTGACACTGTGGTCATATTGTGCTCACCAGGACTTGAACTCGTTCAAGTCATCTTTGGTTGTCAAAGAGCTGGCCTTCTCAGTGTGCCTGTTGTACCCCCTCATCCTTCTTTTGCAAAAGAGCTCAATTATCGACACCTTTTGAGGGTCCTCTCTCAAACAAAGCCCAAAGCTGCAATTGCTAGTGCTGCCTACATCAACAACGTTCTGAACTATCTAAATTCGTCCTCCAATGACAAGAAGCTAGCTCAATTGTTACAAAATCTTGCTTGGGTATCTTCAGATAAGTTCAAAGCTGACAAGGTGGTGGGCAAGAAATTTGATCCTTTGTCATATAAAGGTTGCAAACAAGAGGACCTGTACTTGATTCAGTACACCTCAGGTAGTACTGGGATTCCAAAACCTGTTCTTGTTACAGCAGGATCAGCAGCACATAATGTTAGGACTGCAAGGAAAGCCTATGATCTTCATCCAAATAGTACCATTGTATCGTGGCTTCCTCAGTACCACGATTGTGGACTCATGTTTCTACTCTTAACCATTGTGTCCGGTGCCACATGTGTGCTCATGTCCCCATTTGCCTTCCTCAATAGGCCAAGGCTCTGGCTTGAAGTGATGTCAGATTTCAAAGCCACCTGCACTCCAGTCCCATCATTCACATTGCCACTTGTTCTCAAACGTGGTGGAATAGACATGGGAACTACAACTATAAACCTGTCCAGCATGAAGAATCTTATTATTGTTAATGAGCCTATCTACAAGCCATCTGTTGAGCAATTTCTGCATCAGTTTTCTCGATTGGGGTTAAGCCCCACCTCAATTTCTCCATCTTATGGATTAGCAGAGAATTGTACTTTTGTTTGCACAGCTTGGAGACGATATCATGACAGTACTGCTGCAGCTTCGTTTATGGATAACCTTCCAGAATATAACAAGCTTTTGCCTGTTGCAAGGCTTGCTTCTTCATGTAACATTGTGGAAGAGGAAGACATGGACATTATTATTGTAGATGAAAATACCTGTGAGCTGGTTGAGGATGATACTGAAGGGGAAATCTGGATTTCATCGCCAAGCAATACGTCTGGGTACCTAGACCACCCTTCCTTGACACATGAGGTTTTTCATGGGAGAATAAAAAACAAGGTAGGTCGTTGCTATCTCCGTACTGGAGATAGAGGCATTGTGAAAGGAGACGAAAAGTTTTTGTTTGTCACTGGTAGGTGTGCAGACATCATCAAACTCCAGAATGGTCGAGAAGTACATCCTCATTACATAGAAACTGCAGCCTACAATAGTTGTCCAAGTTTTCTCCGAGGAGGTTGCGTTGCAGCCTTTAAGATTGCAGAAGAAATTGTAGTTGTGGCAGAGATGCAAGGAAATGAGAAAGATGCTGGGCCCTTGACTAGTATAAGTAAAGGAATCAAAGAGACTGTTTTGAAGGAAGAGAATGTTGAGATTGGATTGGTGGTGCTGGTAAGTACTGGTTCTGTCCCGAAGACCACTTCAGGGAAGTTGCAGAGATGGGCAGCCAAGGAAAAGTTTACAGCTGGGAAAATGAAAATCTTGATGGAGATGCAATTTGGAGAAGATGACAGGCCTTCTAATTTGTTCAGAATGAGAATACATGAAAACGAAGGAAGAAAATTATTACCTAAAGTAAAAGAGGACATATTCCTCTCCTTCTCAAGCAACACAACTGGTCCATCTCTGCGCTCTCACTTGTGA 1953 0.4332 MNCENYDPSFPDQPVVDLYLPVWANLPAFQSKPVFIWAEDGGEESANSIKTTMLTYIQLNDSVQAIASHLTTQFQRGDTVVILCSPGLELVQVIFGCQRAGLLSVPVVPPHPSFAKELNYRHLLRVLSQTKPKAAIASAAYINNVLNYLNSSSNDKKLAQLLQNLAWVSSDKFKADKVVGKKFDPLSYKGCKQEDLYLIQYTSGSTGIPKPVLVTAGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLMSPFAFLNRPRLWLEVMSDFKATCTPVPSFTLPLVLKRGGIDMGTTTINLSSMKNLIIVNEPIYKPSVEQFLHQFSRLGLSPTSISPSYGLAENCTFVCTAWRRYHDSTAAASFMDNLPEYNKLLPVARLASSCNIVEEEDMDIIIVDENTCELVEDDTEGEIWISSPSNTSGYLDHPSLTHEVFHGRIKNKVGRCYLRTGDRGIVKGDEKFLFVTGRCADIIKLQNGREVHPHYIETAAYNSCPSFLRGGCVAAFKIAEEIVVVAEMQGNEKDAGPLTSISKGIKETVLKEENVEIGLVVLVSTGSVPKTTSGKLQRWAAKEKFTAGKMKILMEMQFGEDDRPSNLFRMRIHENEGRKLLPKVKEDIFLSFSSNTTGPSLRSHL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01107 650 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 6 602 - -
Pte19g01107 650 SUPERFAMILY Acetyl-CoA synthetase-like 30 592 - -
Pte19g01107 650 Pfam AMP-binding enzyme 50 491 IPR000873 -
Pte19g01107 650 CDD FAAL 34 592 IPR040097 GO:0008610
Pte19g01107 650 Gene3D - 9 484 IPR042099 -
Pte19g01107 650 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Pte19g01107 650 Gene3D - 486 610 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01107 Pte-Chr19 11919590 11921542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01107 6 591 Monolignol Biosynthesis Gene Families AT4G19010 24.311 1.94e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01107 - - qsa:O6P43_016178 855.129