Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01104 ATGCTACTGGTTCTTCTAGTCATTTACTCAGCTTGGATTTGCCCATTCGAGTTTGCCTTTCTGGCTTACAAGGAAGACACACTGTTCATCGTTGACAACATTGTGAATGGCTTCTTTGCCATTGACATAATCCTCGCATTCTTTGTTGCATATCTTGACAACCATTCTTACCTTCTTGTTGACAGCCCTAAGAAAATTGCAATCAGGTACATATCCACCTGGTTCATTTTTGATGTCTGCTCTACCATACCTTTCCAGTACATCAGCTCCTTGTTCAATGATCATAAAGGCAGTGACCTTGGGTATAAACTCCTTAACATGCTCAGACTCTGGCGTCTCAGACGAGTCAGCTCTCTTTTTGCAAGACTTGAGAAGGACATCCGCTTCAATTATTTCTGGACTAGGTGCATAAAGCTCATATCTGTGACCTTGTTTGCGGTACATTGCGCAGGATGTTTGAACTATCTGATAGCAGACAGATACCCAGATCCTAGAAGGACATGGATTGGTGCAATGAACCAAAATTTCAAACAAGAAAGTGTTTGGAACAGATATGTCACTGCAATGTATTGGTCTATTACCACACTTACTACCACTGGATATGGGGATTTGCATGCCGAGAATCCAAGAGAAATGCTGTTTGATATCTTCTACATGCTATTCAATCTGGGATTGACATCTTATCTCATTGGCAACATGACAAACCTTGTAGTACAGTGGACCAGCCGTACCAGAAACTTCAGAGATACAGTGAGAGCAGCTTCAGAATTTTCTACCAGAAACCATTTGCCCTCACGCATACAAGACCAAATGCTATCACACATATGCCTCAAGTTCAAAACAGAAGGACTGAAGCAGCAGGATACCTTAAATGGTTTGCCTAAAGCAATTCGTTCGAGCATTTCACGTTATTTGTTCCTCCCTTTTGTTCAGAAAGTGTATCTTTTTAAAGGGGCTTCCCATGACTTCCTTCTCCAGCTGGTTTCAGAAATGGAAGCTGAATTTTTCCCACCAAGAGAGGATGTACTTCTGCAGAATGAGGCTCCAACAGATCTTTATATACTGGTCTCAGGAGCTGTGGAAATGATATGCAGCCTTGAAGGGGATGAAAAAGTTATTGGGAAGGCTGTTGAAGGAGATACATTTGGAGAGATCGGCGTTTTGTATAACAGACCACAGCCTTATACAGTTCGGACAACAGAGTTATCTCAGATATTGAGACTTAGCAGAACATCTTTGATGAACATCACACAGGCCAATGCTGAAGACGGAGGTGCCATAATCATGGCAAATTATTTTCGGAGAATGAAAGGACAAGAAGGTTCAGGTCTCAGATATCCAGTTACAGATCCAGAACCAATCCTGTCTGACTTGCTTGAGAGAGGATCTCTGAGAGGAAGCTGTGCTCAAGAAGCTTATGCAGACCAATTACATGCAGATTCATTGATACCAGAAGGAAGAAATCTAAGTCTTGGAGAGTATGATGCTATGAATAATGAACAAATCAAACATGATTTCGTAATGAAAAATGCAAATGATGTCAATAGGACACCGGAAGCTTCAGGACAGAAGCAACAAAACAAGATTGGATTTCAACCCTTGCAAATTTACCATGACAAAGAAAGGCTAGATGAATATAAAATTGATTTATTGGGGACAGAAGTAGCAGACAACTCCAAAAAGATTCTCAGAGGAAATAGAAGAGAACATGATCCACAAGTTTCCATGTCCTCCTCAGAGAAGGTGCTGAAAAGCTTTTACTCGAGTGCATCAAGCTACCCCATATATGAAGATTCATGGAAGGGCGTCCAGAAGAGAGTAGTCATCCACATACAATGCGAACATGCAAGCACGAAACAGAGGAAGTATGGGAAGTTAATAATCCTACCTGATTCAATAGAAGAGCTGAAAATGATTGCAGGTGAAAAATTTGGATGCGACAAACCTATCAAAGTTATGAATGAGGATTATGCTGAGATTGATGACATAAGAGTCATACGAAATGGCGATCACTTGTTTTTTGTTCATGAGATGGAAGCTATGGATAGCGATGTAATAGTTATTTAA 2067 0.4074 MLLVLLVIYSAWICPFEFAFLAYKEDTLFIVDNIVNGFFAIDIILAFFVAYLDNHSYLLVDSPKKIAIRYISTWFIFDVCSTIPFQYISSLFNDHKGSDLGYKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLISVTLFAVHCAGCLNYLIADRYPDPRRTWIGAMNQNFKQESVWNRYVTAMYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYLIGNMTNLVVQWTSRTRNFRDTVRAASEFSTRNHLPSRIQDQMLSHICLKFKTEGLKQQDTLNGLPKAIRSSISRYLFLPFVQKVYLFKGASHDFLLQLVSEMEAEFFPPREDVLLQNEAPTDLYILVSGAVEMICSLEGDEKVIGKAVEGDTFGEIGVLYNRPQPYTVRTTELSQILRLSRTSLMNITQANAEDGGAIIMANYFRRMKGQEGSGLRYPVTDPEPILSDLLERGSLRGSCAQEAYADQLHADSLIPEGRNLSLGEYDAMNNEQIKHDFVMKNANDVNRTPEASGQKQQNKIGFQPLQIYHDKERLDEYKIDLLGTEVADNSKKILRGNRREHDPQVSMSSSEKVLKSFYSSASSYPIYEDSWKGVQKRVVIHIQCEHASTKQRKYGKLIILPDSIEELKMIAGEKFGCDKPIKVMNEDYAEIDDIRVIRNGDHLFFVHEMEAMDSDVIVI* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01104 688 Gene3D - 1 239 - -
Pte19g01104 688 SUPERFAMILY Voltage-gated potassium channels 2 238 - -
Pte19g01104 688 Pfam KHA, dimerisation domain of potassium ion channel 605 674 IPR021789 -
Pte19g01104 688 PRINTS EAG/ELK/ERG potassium channel family signature 229 238 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte19g01104 688 PRINTS EAG/ELK/ERG potassium channel family signature 9 16 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte19g01104 688 PRINTS EAG/ELK/ERG potassium channel family signature 32 42 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte19g01104 688 PRINTS EAG/ELK/ERG potassium channel family signature 211 222 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte19g01104 688 PRINTS EAG/ELK/ERG potassium channel family signature 185 202 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte19g01104 688 PRINTS EAG/ELK/ERG potassium channel family signature 43 52 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte19g01104 688 Pfam Ion transport protein 1 244 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte19g01104 688 Pfam Cyclic nucleotide-binding domain 335 419 IPR000595 -
Pte19g01104 688 ProSiteProfiles KHA domain profile. 606 688 IPR021789 -
Pte19g01104 688 FunFam Potassium channel KAT2 303 440 - -
Pte19g01104 688 SUPERFAMILY cAMP-binding domain-like 242 428 IPR018490 -
Pte19g01104 688 SMART cnmp_10 315 432 IPR000595 -
Pte19g01104 688 FunFam Potassium channel KAT3 1 239 - -
Pte19g01104 688 Gene3D Jelly Rolls 282 440 IPR014710 -
Pte19g01104 688 PANTHER POTASSIUM CHANNEL AKT1 1 489 IPR045319 GO:0005249|GO:0006813
Pte19g01104 688 ProSiteProfiles cAMP/cGMP binding motif profile. 315 416 IPR000595 -
Pte19g01104 688 CDD CAP_ED 315 422 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01104 Pte-Chr19 11688740 11693164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01104 1 674 Ion Channels AT5G46240 58.309 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01104 K21867 - zju:107413728 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01104 19 11688740 11693164 Pte19g01104 19 11688740 11693164 RCT