Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01093 ATGGCTTCCTCAACAATGGCTTTGTCATCCCCATCTTTTGTCGGCAAGCCAGTGACGCTTGGAAGATCAACCCCTGAGCTGGGCACTTCAAGAATCACCATGAGAAAAGCTACCACCAAGAAGAGTGTCCCTTCCAGCAGCCCATGGTACGGTCCAGACAGAGTCAAGTACTTGGGCCCATTCTCCGGCGAATCTCCATCCTACCTCACCGGAGAATTCCCAGGTGACTACGGCTGGGACACTGCTGGGCTTTCAGCTGACCCAGAGACCTTTGCTAAGAACCGTGAACTTGAAGTAATCCACTGCAGATGGGCGATGCTTGGTGCTCTTGGATGCGTCTTCCCCGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGAGCGCAGATCTTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCCCAGAGCATCCTTGCTATTTGGGCCTGCCAAGTTATCTTAATGGGTGCTGTTGAGGGTTACAGAATCGCTGGTGGGCCACTTGGTGAGGTGACTGACCCACTCTACCCAGGTGGAAGTTTCGACCCACTGGGTCTTGCTGATGATCCAGAGGCATTTGCTGAGTTGAAGGTGAAGGAAATCAAGAATGGTAGATTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGCAAGGGACCTATTGAAAACCTTGCTGACCATCTTGCTGACCCAGTCAACAACAATGCTTGGGCATATGCTACAAACTTCGTCCCAGGAAAGTGA 798 0.5238 MASSTMALSSPSFVGKPVTLGRSTPELGTSRITMRKATTKKSVPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01093 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
Pte19g01093 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Pte19g01093 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Pte19g01093 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Pte19g01093 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01093 Pte-Chr19 11422037 11422834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01093 1 266 Chloroplast and Mitochondria Gene Families AT1G29910 86.940 1.82e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01093 K08912 - qsu:112030611 505.368