Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01089 ATGGAGAAGTTGACAGGTTGGGCAAGAGATGAAGTTATTGGCAAAATGCTTCCAGGCGAAGTTTTTGGAAACTTTTGTCTGTTGAAAGGTCAAGATATGCTGACTAAGCTTATGATTTTGTTGTATAATGGTATCAGTGGTCAAGACACAGATAAAATCTCGTTTGAGTTTTTTGATAAGAAAGGAAAACTTGTGGAGGTGATCATTACGGCAAACAAGAGGACTGATGCAAATGAAAATGTAATTGGCTGCTTCTGCTTTTTAGAGGTCATTGTATGTGATGAATATCAGTCCTCAGGTAAGAACTTCAATCGGGACAGTGAATGCTTCAATAGACTGAAGGAATTGGCTTATATGAGGCAAGAAATGAGAAGTCCTTTAGACGGAATTCGGTTCACTCACAGACTCCTGGAGAATACAGCTATATCAGAATCCCAGAAGCAGTTTCTTGAAATTAGTAATGCATGTGAAAGACAGATCATGACAGTCATTGAAGATTTGGATTTCAGAAGTATAGAGGACGGTAGTGTGCAACTGAACCTTGAAGAGTTTTGCTTGGAAAATGTTTTGGATGCCGTTGTTGGTCAAGCAATGATCTTGCTGAGGGAGAAAAACTTGCAGCTGTTTCATGAAATTCCGGAAGAAACCAAAAGTCTCTCTCTATTTGGCGATCAGATCAGGCTTCAGCTCGCCTTATCAGACTTCTTACTTGTTGTTGTTCACCATGCACCATCTTCGGATTGCTGGGTAGAAATTAAGGTTTCACCTGGCGTAAAGTTGATGCAGGATGGAAGTGAATTCACCCGTTTTCAGCTCAGAATCACCCACCCTGGTGAAGGTCTTCCTTCTGCTGTTATCAAAGATATGTATGAGGCAGAAAATGAATGGAGTACACAAGAAGGTCTAGGGCTATACATGTCCAGAAAACTTCTCAGCAAGATGAATTGCCAAGTCCGCTATATAAGGGAACATGATAAATGCTACTTTCTTATTGACTTTGAACTTAGAACGAGAAAATAG 1020 0.401 MEKLTGWARDEVIGKMLPGEVFGNFCLLKGQDMLTKLMILLYNGISGQDTDKISFEFFDKKGKLVEVIITANKRTDANENVIGCFCFLEVIVCDEYQSSGKNFNRDSECFNRLKELAYMRQEMRSPLDGIRFTHRLLENTAISESQKQFLEISNACERQIMTVIEDLDFRSIEDGSVQLNLEEFCLENVLDAVVGQAMILLREKNLQLFHEIPEETKSLSLFGDQIRLQLALSDFLLVVVHHAPSSDCWVEIKVSPGVKLMQDGSEFTRFQLRITHPGEGLPSAVIKDMYEAENEWSTQEGLGLYMSRKLLSKMNCQVRYIREHDKCYFLIDFELRTRK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01089 339 Gene3D - 101 174 - -
Pte19g01089 339 ProSiteProfiles Histidine kinase domain profile. 118 337 IPR005467 -
Pte19g01089 339 ProSiteProfiles PAS repeat profile. 1 15 IPR000014 -
Pte19g01089 339 Gene3D PAS domain 1 94 - -
Pte19g01089 339 CDD HisKA 116 171 IPR003661 GO:0000155|GO:0007165
Pte19g01089 339 Gene3D - 175 338 IPR036890 -
Pte19g01089 339 SMART HisKA_10 111 175 IPR003661 GO:0000155|GO:0007165
Pte19g01089 339 Pfam PAS fold 1 91 IPR013767 GO:0006355
Pte19g01089 339 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 223 326 IPR003594 -
Pte19g01089 339 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 167 326 IPR036890 -
Pte19g01089 339 Pfam His Kinase A (phospho-acceptor) domain 115 175 IPR003661 GO:0000155|GO:0007165
Pte19g01089 339 SMART HKATPase_4 223 337 IPR003594 -
Pte19g01089 339 PANTHER SENSORY TRANSDUCTION HISTIDINE KINASE 115 256 - -
Pte19g01089 339 SUPERFAMILY PYP-like sensor domain (PAS domain) 1 86 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01089 Pte-Chr19 11282089 11284244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01089 1 337 Histidine Kinase Gene Family AT4G18130 51.479 1.12e-116 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01089 K12123 - cave:132170210 489.96