Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte19g01088 | ATGGATCAGGAACCTCTTCTACCATATTCAAGCCCAAGGAAGAAACCACCATCTTTAACCCAACTGTTCACACTTCCAGAGCATGATGAGCTAACTTTGCCCATACCACCTGTAACAAGTATAACACCCTCGGAGCTCAAGGAACGTCTTATCTTCGGTCCATCTTCACCACAAGATTCTTCTTCGGTTTTAATTGAAAGTTTGACTCTTTCTCTCAATTCTCCCAGGCCCTCATCTTCTTCTGCTCCACAAGATTCAGTAAACCCACCAGAACTGTCAAATCAACAAACTTGGCTCCTTGACCCCAATTATTCAATCCATAAAACCAATCTTCACCGGTCCAAAACGGCTCCCGCCATGGCTGCGATCAACGATGTCAAAACGCATCCATCTGTGACTACACAATTTGGTTCTCAAACGATTGTGCGCCAAGCTGTTATCCTTCTCGTGGCTTATTTGATGTTAGGTGTGGCTATATATTGGTTTAACCGTCATGAATTTTCTGCTACTGAGACGCACCCTATTGTGGATGGTATTTACTTTTGTATAGTTACTATGTGCACAATTGGCTATGGTGATATAATACCAACTGGAACAGCAACTAAGTTATTCTCCATTTTGTTTGTGCTGGTGGGATTTGGGTTTATTGACATTTTGCTCAGTGGGATGGTTAGTTATGTTCTTGATTTGCAAGAGAGTTATCTCTTAAATACGGTAAAGGGCAGAGAACAAAAGCATTCTCCACCATCATATATAATTGATGTGAAGAAGGGGAGAATGAGGATTAGACTGAAGGTGGCGTTAGCATTGGGGGTTGTTGTTCTGTGTATCGGAATTGGCATAGTTGTTATGCATTTTGTGGAGAACTTTGGATGGTTGGATTCCCTTTATCTCTCGGTGATGTCAGTTACTACAGTTGGTTACGGGGATCGAGCCTTCAAGTCAATGCCTGGTCGGATTTTCGCTTCAATCTGGTTGCTTGTGTCAACACTTGCTGTGGCACGAGCTTTCCTTTATTTTGCAGAGGCCAGAGTCGACAAGCGGCACAGGAGGATGGTAAAGTGGATTCTTGGTGAAGATATGACAGTTTCTCAATTTTTTGCTGCAGATATAGACAACAATGGATATGTTAGTAAATCAGAATATGTCGTGTACAAGCTCAAGGAGATGGGGAAAGTATCAGAGAAAGACATTATGCTGATATCTCAGAACTTTGATAGACTGGACACTGGCAATTTTGGGAAGATCACTCTTGCTGACCTCATGGAGCATCAACACAAAAGTTAG | 1287 | 0.4227 | MDQEPLLPYSSPRKKPPSLTQLFTLPEHDELTLPIPPVTSITPSELKERLIFGPSSPQDSSSVLIESLTLSLNSPRPSSSSAPQDSVNPPELSNQQTWLLDPNYSIHKTNLHRSKTAPAMAAINDVKTHPSVTTQFGSQTIVRQAVILLVAYLMLGVAIYWFNRHEFSATETHPIVDGIYFCIVTMCTIGYGDIIPTGTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQESYLLNTVKGREQKHSPPSYIIDVKKGRMRIRLKVALALGVVVLCIGIGIVVMHFVENFGWLDSLYLSVMSVTTVGYGDRAFKSMPGRIFASIWLLVSTLAVARAFLYFAEARVDKRHRRMVKWILGEDMTVSQFFAADIDNNGYVSKSEYVVYKLKEMGKVSEKDIMLISQNFDRLDTGNFGKITLADLMEHQHKS* | 429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte19g01088 | 428 | Gene3D | - | 123 | 247 | - | - | |
Pte19g01088 | 428 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pte19g01088 | 428 | Pfam | Ion channel | 272 | 342 | IPR013099 | - | |
Pte19g01088 | 428 | Pfam | Ion channel | 147 | 227 | IPR013099 | - | |
Pte19g01088 | 428 | SUPERFAMILY | EF-hand | 360 | 426 | IPR011992 | - | |
Pte19g01088 | 428 | Gene3D | - | 335 | 428 | - | - | |
Pte19g01088 | 428 | Gene3D | - | 271 | 334 | - | - | |
Pte19g01088 | 428 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 147 | 399 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Pte19g01088 | 428 | FunFam | Two-pore potassium channel 3 | 249 | 363 | - | - | |
Pte19g01088 | 428 | ProSitePatterns | EF-hand calcium-binding domain. | 370 | 382 | IPR018247 | - | |
Pte19g01088 | 428 | PRINTS | Two pore domain K+ channel signature | 184 | 212 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Pte19g01088 | 428 | PRINTS | Two pore domain K+ channel signature | 304 | 313 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Pte19g01088 | 428 | SUPERFAMILY | Voltage-gated potassium channels | 255 | 361 | - | - | |
Pte19g01088 | 428 | SUPERFAMILY | Voltage-gated potassium channels | 138 | 227 | - | - | |
Pte19g01088 | 428 | MobiDBLite | consensus disorder prediction | 74 | 94 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte19g01088 | Pte-Chr19 | 11253025 | 11257013 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte19g01088 | 4 | 423 | Ion Channels | AT4G18160 | 62.162 | 0.0 | 510 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte19g01088 | K05389 | - | cave:132168548 | 583.948 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte19g01088 | 19 | 11253025 | 11257013 | Pte19g01088 | 19 | 11253025 | 11257013 | RCT | |
Pte2g00948 | 2 | 9469413 | 9470787 | Pte19g01088 | 19 | 11253025 | 11257013 | RCT |