Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01050 ATGATGAAGTGGGGTAAGAAGAAATCAAAGAAGTCATCTTTGTCTTCTTCTTCAAAACCTTCTTTGATCTCTCATGTGTTTCCCATTTCATGGCTGTCCAAGTTCAAGCAAATGAGCATCCATTCAAAGCCAAATACTAAAAGGGCAACCAAGAAAAATGGGAACCAGAGCCCTTCCACCATGGATTCACCAATAACATTCTACGCTGGTGGAAGCAATGGTAGGTTTTATAGTGGGGAAGGTGATGCGTTTTGGAGACTTTCATTTGGTGATGATGAATATCAAGATGACAAGAGTAAGAGTGTCAGTTCTGAATGGCGTGATGAACATTTTGTTCAACCTTTGGCAAGTCATCACTGTAGACAGAATTCAACACAGCTTGGAAGAGAAGGGCATGCTCTACACATGGAAGTGCATGATCAAGACAAAGAGTTTGAAACATTGAGGAGGAGATTTGAGAGGAAGACGCAAAGAGAATTCAAAGATAAGGTTTTGGAACTGAAAAGAAAAGCAGCGGAAGCTGACATGAAATCAACCAAAATGGAAGAGAAAGATGTGTTGCAGCTTGAATCACCTACAAGAATTTGGACACCAAGGAAACATTGTTTTGTCTCCCCTTCAAATTTCGATAAAGCTAGTCCCGCAACAAAAGGAGACTTTGTACTCGGTACACATGAATTGGATACACCATCTATGAAAATGAAAAGTGAATTGCCAAAGTTGAAGAGTGAAAAACAGAGGAAATTATTACATGTCAGCAGTAGGAACCCAAGGCATAACTCAAAGGTCAGAGTTTACTCTCCCAGAACAGCATCAAAAGTTGAGATTTGCAAAGTGAAAGCTTTAGAAGACATGAAGAAAGCAAGGCTAAGAACAAAGAAGGCGGCGAAAAGAATTGTGGAAGAAACTGATGAAGACTTGGATAGTTTTGCAGTAGTGAAATGTTCGTACAATCCACAAAAGGATTTCAGAGATTCAATGTTGGAAATGATCACTGAGAAACAGATGAGGCATCCAGAAGAAATGGAAGAGCTTTTGGCTTGTTATCTGACACTGAATTCAGATGAGTACCATGATCTCATTATCAAAGTGTTCAGGCAGGTGTGGTTCGAATTGAACAAAGATAGTTTTGGCATAGAATGA 1143 0.3955 MMKWGKKKSKKSSLSSSSKPSLISHVFPISWLSKFKQMSIHSKPNTKRATKKNGNQSPSTMDSPITFYAGGSNGRFYSGEGDAFWRLSFGDDEYQDDKSKSVSSEWRDEHFVQPLASHHCRQNSTQLGREGHALHMEVHDQDKEFETLRRRFERKTQREFKDKVLELKRKAAEADMKSTKMEEKDVLQLESPTRIWTPRKHCFVSPSNFDKASPATKGDFVLGTHELDTPSMKMKSELPKLKSEKQRKLLHVSSRNPRHNSKVRVYSPRTASKVEICKVKALEDMKKARLRTKKAAKRIVEETDEDLDSFAVVKCSYNPQKDFRDSMLEMITEKQMRHPEEMEELLACYLTLNSDEYHDLIIKVFRQVWFELNKDSFGIE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01050 380 MobiDBLite consensus disorder prediction 1 21 - -
Pte19g01050 380 Coils Coil 164 184 - -
Pte19g01050 380 NCBIfam uncharacterized plant-specific domain TIGR01568 311 373 IPR006458 -
Pte19g01050 380 MobiDBLite consensus disorder prediction 242 262 - -
Pte19g01050 380 Pfam Transcriptional repressor, ovate 316 372 IPR006458 -
Pte19g01050 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 156 373 IPR038933 GO:0045892
Pte19g01050 380 MobiDBLite consensus disorder prediction 41 65 - -
Pte19g01050 380 ProSiteProfiles OVATE domain profile. 312 371 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01050 Pte-Chr19 10261562 10262959 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte19g01050 Ovate 8.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01050 - - qsa:O6P43_012832 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01050 19 10261562 10262959 Pte19g01050 19 10261562 10262959 RCT