Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01041 ATGGTTCAGAAGACTGGGAAAGAAGAAATCGAGTTCAAAGTCCCAGAAACGACTACCCTTTGCGTTAACAACTGCGGTGTAGTTGGCAACCCAGCTACCAATAACATGTGCCAGAAATGTTTCACTGCGACTACATCAACAGCGACGACGGAAAATTCAACGACAGCTTCATCGTCCTCGTCCAACTTGATTGCAGCAAGTTCAACGCCCATGAAATTCTCTGCGGAGAAAAGTCCTAGATGCAGTGCATCTTGCTCGCCTGATAGGCTCAAAGAGTCATCTTACTTGATCAGACACCAACCCTCAACGGATCAGGCTGATTCGGAAGCTCCAACGGCGTCGGAAGTTAAAAGGATCGTCGGTCGATGTGCTGGCTGCCGGAGAAAGGTGGGGTTGACCGGTTTTCGATGTAGATGTGGGGAGTTGTTCTGTGCGGAGCATAGGTATTCCGATCGACATGACTGTAGTTATGATTACAAAGCTGCCGGACGTGAAGCCATCGCCAGAGAAAACCCGGTCGTTAAAGCTGCCAAGATTATTAGGGTTTGA 549 0.4882 MVQKTGKEEIEFKVPETTTLCVNNCGVVGNPATNNMCQKCFTATTSTATTENSTTASSSSSNLIAASSTPMKFSAEKSPRCSASCSPDRLKESSYLIRHQPSTDQADSEAPTASEVKRIVGRCAGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIIRV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01041 182 PANTHER AN1-TYPE ZINC FINGER PROTEIN 18 181 - -
Pte19g01041 182 ProSiteProfiles Zinc finger AN1-type profile. 117 163 IPR000058 GO:0008270
Pte19g01041 182 SUPERFAMILY AN1-like Zinc finger 106 176 IPR035896 -
Pte19g01041 182 Gene3D - 97 178 IPR035896 -
Pte19g01041 182 Gene3D - 8 68 - -
Pte19g01041 182 SMART AN1_Zf_4 123 160 IPR000058 GO:0008270
Pte19g01041 182 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Pte19g01041 182 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Pte19g01041 182 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 62 - -
Pte19g01041 182 FunFam Zinc finger AN1-type containing 6 98 178 - -
Pte19g01041 182 Pfam AN1-like Zinc finger 123 160 IPR000058 GO:0008270
Pte19g01041 182 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01041 Pte-Chr19 10058639 10060449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01041 8 183 C2H2 Transcription Factor Family AT3G52800 38.587 1.33e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01041 - - qsa:O6P43_001338 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01041 19 10058639 10060449 Pte15g01457 15 11645684 11647100 RCT
Pte19g01041 19 10058639 10060449 Pte19g01041 19 10058639 10060449 RCT