Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01037 ATGAGGGGACATGAGCCTCGTTCAAGCTCTTCCTGTGCAGCATGCAAGCTTTTGAAAAGAAGATGCACACCGAACTGTATATTTGCACCTCACTTCCGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCACAAGGTCTTCGGAGCAAGCAATGTCAGCAAGATCCTGATTGAAGTGCCGGAGGAGCAACGCGAAGACACTGTGAATTCACTGGCTTATGAGGCTGAGGCAAGGCTTAGAGACCCTGTGTATGGATGCATTGGTGCTATAGCTTTGTTGCAAAGAAAGATGGTGGAACTTCAACATGATCTGGCTATTGCCAGAGCTCGTCTAGCTCGTCACACCCTTACCTCCACTGCTGCTACTGCTGCTACTTCTGCAGCCCTCTTATATGACCAACTTAG 404 0.4827 MRGHEPRSSSSCAACKLLKRRCTPNCIFAPHFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIARARLARHTLTSTAATAATSAALLYDQL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01037 134 Coils Coil 90 110 - -
Pte19g01037 134 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Pte19g01037 134 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Pte19g01037 134 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01037 Pte-Chr19 10005893 10006456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01037 1 115 AS2 family AT3G11090 81.739 2.32e-68 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte19g01037 LOB 5.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01037 - - vvi:100243201 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01037 19 10005893 10006456 Pte19g01037 19 10005893 10006456 RCT