Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01018 ATGGCAGATAACGTTGCAAACACCACCAACAAGAAAGAAAATCCATCTGTGCTTTTGGATCGTTTTGAGCTTGGGAAGCTCCTTGGCCATGGCACTTTCGCAAAAGTCTACCAAGCCCGCAACATCAAAACCGGTGACAGTGTGGCCATCAAGGTTATAGACAAAGAGAAAATCCTAAAGGGTGGTCTAATGGCTCACATCAAGCGTGAGATCTCCATCCTTCGCCGTGTTCGCCACCCCAATATTGTTCAATTGTTCGAGGTCATGGCCACAAAGTCAAAGATCTACTTTATTATGGAATTTGTACGTGGTGGTGAGCTATTCAACAAGGTGGCGAAAGGTAGGTTGAAAGAAGAATTTGCTAGAAAATACTTCCAGCAATTGATTTCAGCTGTTAGCTTTTGTCACGCTAGAGGGGTCTACCATAGGGATCTAAAGCCTGAGAATTTGTTGCTTGACGATAATGGTGACTTGAAAGTTTCTGATTTTGGTCTGAGTGCTGTGTCTGATCAAATAAGACAAGATGGTCTCTTTCACACCTTCTGCGGTACTCCTGCTTATGTTGCTCCTGAGGTTTTGGCCAGAAAAGGCTATGATGCTGCGAAGGTGGATATCTGGTCTTGTGGGGTGATCTTATTTGTTTTGATGGCTGGCTATTTACCTTTCCATGATCAAAATGTGATGGCTATATATAGGAAGATTTACAAGGGTGAATTTCGTTGTCCTAGATGGTTTTCACCTGAGTTGATTAAGCTTCTTAAAAGGCTTCTAGATACAAACCCTGAATCCAGGATTACAATTCCTGAGATTATGGAGACTAGGTGGTTCAAAAAAGGGTTTAAACATATAAAATTTTACGTTGAAGATGATAGGGTTTGCTCTGTTCAGGAAAACGAAAATGATACCGAATCTGATACAGAATCTTTGCAAGACCATTCAATGTGTGAATCTGATTCTGAGATAGAAACAAGGAGAAGAGTATGTCCCCTTCCAAGGCCTGCAAGCTTGAATGCATTTGATATCATATCGTTTTCCCGAGGTTTCGATCTTTCAGGGCTGTTTGAGGAAGGTGGAGATGAGGCAAGGTTTGTGACTAATGCTTCTGTATCCAAAATTATATTGAAATTGGAGGAAATAGCTAAAGATGTTAGCTTCAACGTGAGGAAGAAGGACTGCAGAGTCAGCTTGGAGGGGACAAGAGAAGGTGTAAAGGGGCCATTGACGATTGCTGCAGAGATATTCGAATTGACACCTTCTTTGGTCGTGGTGGAGGTTAAGAGGAAAGGAGGAGATAAAGGTGAGTATGAGAATTTCTGTAACGAAGAACTGAAGCCTGGTTTGCACAAGTTGATGATGGAGGAATCAGCTTCTTCTTCGCATTCACCTTCACCTTTAGACACTGAATAG 1407 0.4208 MADNVANTTNKKENPSVLLDRFELGKLLGHGTFAKVYQARNIKTGDSVAIKVIDKEKILKGGLMAHIKREISILRRVRHPNIVQLFEVMATKSKIYFIMEFVRGGELFNKVAKGRLKEEFARKYFQQLISAVSFCHARGVYHRDLKPENLLLDDNGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDIWSCGVILFVLMAGYLPFHDQNVMAIYRKIYKGEFRCPRWFSPELIKLLKRLLDTNPESRITIPEIMETRWFKKGFKHIKFYVEDDRVCSVQENENDTESDTESLQDHSMCESDSEIETRRRVCPLPRPASLNAFDIISFSRGFDLSGLFEEGGDEARFVTNASVSKIILKLEEIAKDVSFNVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKRKGGDKGEYENFCNEELKPGLHKLMMEESASSSHSPSPLDTE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01018 468 FunFam Non-specific serine/threonine protein kinase 333 451 - -
Pte19g01018 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pte19g01018 468 Pfam NAF domain 333 389 IPR004041 GO:0007165
Pte19g01018 468 ProSiteProfiles NAF domain profile. 331 355 IPR018451 GO:0007165
Pte19g01018 468 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01018 468 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 442 - -
Pte19g01018 468 Gene3D Transferase(Phosphotransferase) domain 1 12 328 - -
Pte19g01018 468 CDD CIPK_C 337 447 - -
Pte19g01018 468 Gene3D Kinase associated domain 1, KA1 331 452 - -
Pte19g01018 468 FunFam Non-specific serine/threonine protein kinase 12 319 - -
Pte19g01018 468 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Pte19g01018 468 Pfam Protein kinase domain 23 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01018 468 CDD STKc_SnRK3 21 275 - -
Pte19g01018 468 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g01018 468 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Pte19g01018 468 SUPERFAMILY Protein kinase-like (PK-like) 18 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01018 Pte-Chr19 9616625 9618329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01018 1 466 CBL-interacting serine-threonine protein kinases AT4G18700 76.433 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte19g01018 Pkinase 4.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01018 - - qsa:O6P43_031947 771.926