Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g01015 ATGGAGATTGAAGCTGAAGGTGATCATCCAAAGCAACATACAGTGGCAGCGAGAGAAGAAATGGTGGATGGTGACAAACTAAAAGGGAAGAGGTCTGAAGAGCAAACAGAAAGTGCTTCTTTGGGATCTTCCCAGAAATGCTCATCCTTTGATTTGAACGAAGAAGCCACAAAGGGAGAGTACAATGATGATACAGTTGAAGCTGGTGGTCAAGCCAATTATATTGGCAAAAGAAATGATGTTAATATTACAAAGAGTAATAGAAGTACATTCAAAGAAGGAAATGAGAGAAAGGCTACAGTGAGGCAGTATATTAGATCCAAGATGCCTCGGCTTCGATGGACTCCTGATCTACATTTCTCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGACAGGGCTACTCCTAAAATGGTTCTCCAGCTAATGAATGTGAAAGGGCTCAGCATTGCTCATGTAAAGAGTCATTTGCAGATGTACAGAAGCAAGAAGCTCGATGAGGCAGGCCAAGTACTATCTCAGATATGCAAGCCAGGAAAGGAAGTAGATCTCGTATCCAAGGGTCCTCTTCAACACTTCAAAATGGGAAATGGCGGTATTATTCTGAGAAGAAACTTAAACGGGGTTGGTCTTTCACAGCCTTTATTTTCTCAAGCAGCATCAAATATCAAAGCTGACACAAGGTACCAACCTTGTTGGCATTCTAGTCAGCATTGTTTTACAAGAGCAAGTTCCATTGTAAGCAACAATCACAATGTGATACCCACAACGTACCAAACGCAAGGCAAGTCATCACTCCCGACTCACTCCCAGCTAGTAGATAGAAACGGAAGTTCTTGGATTGCACCCATGAGACCTAGTCAATTTCTTGAAGGAAAAAGATGGCCGCCCTTAGACATGATTAATAATCAATACAAAGCCAAAATGAATGCCAGTATCAACTGTGCTGATTCTATCTCCATCTCTCTCAAACATCAATTTGCAAAGAGTGCAACAGCTTCTTCTGAAGCTGAGTGGAGCTCAAGTCATCATCTGCCATTTTACATTCAAGGTCATCAGAGGAATCTGCTAAGTCGACAAGGATATGAATCCCCATTTCGAATTGAGCTGAAGCAAGAAGACAAGAGGGGAGATAAAAGCAACTGGTTTTCTGATTTAAGATTGGGATTGAGCAATAAAGATGAGATTGACAATGTTAACACTAATCTTTCACTTTCTTAG 1224 0.4142 MEIEAEGDHPKQHTVAAREEMVDGDKLKGKRSEEQTESASLGSSQKCSSFDLNEEATKGEYNDDTVEAGGQANYIGKRNDVNITKSNRSTFKEGNERKATVRQYIRSKMPRLRWTPDLHFSFVHAVERLGGQDRATPKMVLQLMNVKGLSIAHVKSHLQMYRSKKLDEAGQVLSQICKPGKEVDLVSKGPLQHFKMGNGGIILRRNLNGVGLSQPLFSQAASNIKADTRYQPCWHSSQHCFTRASSIVSNNHNVIPTTYQTQGKSSLPTHSQLVDRNGSSWIAPMRPSQFLEGKRWPPLDMINNQYKAKMNASINCADSISISLKHQFAKSATASSEAEWSSSHHLPFYIQGHQRNLLSRQGYESPFRIELKQEDKRGDKSNWFSDLRLGLSNKDEIDNVNTNLSLS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g01015 407 Gene3D - 109 166 - -
Pte19g01015 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 166 IPR017930 -
Pte19g01015 407 MobiDBLite consensus disorder prediction 1 49 - -
Pte19g01015 407 FunFam Myb family transcription factor 108 166 - -
Pte19g01015 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 110 165 IPR006447 GO:0003677
Pte19g01015 407 SUPERFAMILY Homeodomain-like 108 164 IPR009057 -
Pte19g01015 407 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 92 239 IPR046955 GO:0003700
Pte19g01015 407 Pfam Myb-like DNA-binding domain 112 162 IPR001005 -
Pte19g01015 407 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g01015 Pte-Chr19 9572105 9576893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g01015 101 171 G2-like Transcription Factor Family AT2G42660 80.282 8.72e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte19g01015 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g01015 - - qsa:O6P43_031944 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g01015 19 9572105 9576893 Pte19g01015 19 9572105 9576893 RCT