Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00985 ATGGCTTCATCTAATAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAACACTCATCACCAATGGCAGCATGACATCAACTCTTCCCTCATGTCAACTGGCTGCCATAGGAGCCCATACACTTCAGGCTGTGAAGAGCGCAGTCCAGACCCAAAGCCTAGATGGAATCCAAAACCAGAGCAAATTCGCATACTGGAAGCAATCTTTAACTCTGGCATGGTAAACCCACCAAGGGATGAGATACGAAAGATCAGGGCACAGCTGCAAGAGTATGGCCAAGTGGGCGATGCCAATGTTTTCTACTGGTTCCAGAACCGTAAATCTAGAAGCAAGCACAAACTTCGTCACCTCCAAAACTCAAAAAACCAGGGGCCACAAATTCAAAACAGTACTATATCATCTTCATCTTCATCCACAGTTGCACCTCGGTCCACTCGAACTGGTATAGCACCTTGTTCTTCATCTTCGTCCTCTGAGAAATCATCGTCAAAAACTGCACCTGTACACACTAAGAAATTCTCGGTAGGGTTCTCTAAAATCCCCGAGTCTACGTCAAACTCTCCAACTGCCTCGGTGAACCGGGCTAGCTATTTGCAAAGCTATAGTGAGGCCGGTCTGCCAGTTGAACCCTTCTTTCCGGTGCAACATACGGCTGGGATGGTGCAACACAACGGAGGTGGAGCTGCAGGAACTGCAAATTTAACGCAAGGTTTTTGCTTCTCTGAGCTTTCAAATGTTGTCCAAGTGCCTCAACATATTGTCGGTCCTTGTACCAGCCTCCTTCTCAGTGAAATCATGAATCATGGAGCCTCAAAGAAAGGGGATCAAGAAGAGAGAACCATGAAAATGCACCACCCTAATCAGCTTAGTTTCTTAGTACCCACTACTACTAGCCCTCACTCTCATGTCTCTGCCATCTCCAGTAGCACTGTCACAATTCCGTCCTACATCTCTCAGATTGAAGGTGTTGGTGAACCCACTTCTGTGGGACTAAGTCCTCCTAGTTCAACCAAATCAACGGTGTTCATCAACGATGTAGCTTTCGATGTACCTGTGGGACCATTCAATGTTCGAGAGGCTTTTGGTGTGGACTCTGTTTTAATTCACTCTTCTGGTCAGCCAGTTCTCACCAATGAATGGGGTCTTACACTTCAGTCACTCCAACATGGGGCATCCTACTATCTGGTGCCAGCCTTAACTTTTCATAATTACATCGTTAATTAA 1227 0.4654 MASSNRHWPSMFKSKPCNTHHQWQHDINSSLMSTGCHRSPYTSGCEERSPDPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNQGPQIQNSTISSSSSSTVAPRSTRTGIAPCSSSSSSEKSSSKTAPVHTKKFSVGFSKIPESTSNSPTASVNRASYLQSYSEAGLPVEPFFPVQHTAGMVQHNGGGAAGTANLTQGFCFSELSNVVQVPQHIVGPCTSLLLSEIMNHGASKKGDQEERTMKMHHPNQLSFLVPTTTSPHSHVSAISSSTVTIPSYISQIEGVGEPTSVGLSPPSSTKSTVFINDVAFDVPVGPFNVREAFGVDSVLIHSSGQPVLTNEWGLTLQSLQHGASYYLVPALTFHNYIVN* 409
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00985 408 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Pte19g00985 408 FunFam WUSCHEL-related homeobox 11 53 120 - -
Pte19g00985 408 SMART HOX_1 51 118 IPR001356 GO:0003677
Pte19g00985 408 CDD homeodomain 52 114 IPR001356 GO:0003677
Pte19g00985 408 Gene3D - 53 119 - -
Pte19g00985 408 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Pte19g00985 408 MobiDBLite consensus disorder prediction 120 169 - -
Pte19g00985 408 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 397 IPR044557 GO:0003700|GO:0050793
Pte19g00985 408 MobiDBLite consensus disorder prediction 112 169 - -
Pte19g00985 408 MobiDBLite consensus disorder prediction 38 58 - -
Pte19g00985 408 SUPERFAMILY Homeodomain-like 47 117 IPR009057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte19g00985 Pte-Chr19 8806715 8808700 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00985 1 120 Wox Gene Family AT2G33880 84.426 4.38e-67 216
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte19g00985 Homeodomain 1.3e-14 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00985 - - qsa:O6P43_012710 498.049
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00985 19 8806715 8808700 Pte19g00985 19 8806715 8808700 RCT