Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00965 ATGGGCGTGGACTATTATAAGGTTTTGCAGGTTGACAAGAACGCTAACGATGATGACTTGAAGAAAGCCTATAGAAAACTTGCCATGAAATGGCATCCGGATAAGAACCCCAGCAATAAGAAAGAAGCTGAGGCTAAATTCAAACAGATTTCTGAAGCGTACGAGGTACTCACTGATCCTCAGAAGAGAGCTATCTATGACCAGTATGGAGAAGAAGGTCTTAAAGGCAATATGCCACCTCCAGATGCTGGCGGAGCATCATTTTTTCAAAGTGGAGATGGTTCAACAACTTTCAGATTTAACCCCAGAAATGCAGATGACATATTTGCTGAGTTTTTCGGGTTCTCGAGTCCATTTGGTGGGATGGGAAGTGGCGGCGGCATGAGGGGCAGTTCAAGATCGTTTGGTGGAATGTTTGGTGATGATATGTTCAGTTCATTTGGGGAAGGCAGACCAATGAGTCAAGCTCCAAGGAAGGCAGCTCCAATTGAAAGTACACTACCTTGTACTCTGGAGGAGCTGTACAAGGGTACCACCAAAAAAATGAAGATCTCCAGAGAAATTGCTGATGCAAGCGGAAAAACCATAACTGTGGAAGAAATTCTAACTATTGAAATCAAACCCGGGTGGAAGAAAGGGACAAAGATCACTTTCACTGAGAAAGGAAATGAGCAACCGAATATTATACCTGCAGATCTGGTCTTCATAATTGATGAGAAACCACACAGGACATTCAGAAGGGACGTTAATGATTTAGTTGTTACACAGAAGATATCGCTTTCAGAGGCTCTTACAGGCTACACAGTCCGTTTGACAACTCTAGATGGAAGGAGTCTAACTATTCCCATAAACAACGTAATTCATCCAAGTTATGAGGAGGTCGTCCCAAAAGAAGGCATGCCAATACCAAAAGATCCTTCACATAAGGGCAATCTTAGAATCAAGTTTGACATCAAATTCCCATCGAAGTTGACATCTGAGCAGAAGGCTGGGATCAAAAGACTTCTGGCGCCTTAG 1017 0.4307 MGVDYYKVLQVDKNANDDDLKKAYRKLAMKWHPDKNPSNKKEAEAKFKQISEAYEVLTDPQKRAIYDQYGEEGLKGNMPPPDAGGASFFQSGDGSTTFRFNPRNADDIFAEFFGFSSPFGGMGSGGGMRGSSRSFGGMFGDDMFSSFGEGRPMSQAPRKAAPIESTLPCTLEELYKGTTKKMKISREIADASGKTITVEEILTIEIKPGWKKGTKITFTEKGNEQPNIIPADLVFIIDEKPHRTFRRDVNDLVVTQKISLSEALTGYTVRLTTLDGRSLTIPINNVIHPSYEEVVPKEGMPIPKDPSHKGNLRIKFDIKFPSKLTSEQKAGIKRLLAP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00965 338 Pfam DnaJ C terminal domain 163 321 IPR002939 -
Pte19g00965 338 Gene3D - 242 322 - -
Pte19g00965 338 CDD DnaJ 4 59 IPR001623 -
Pte19g00965 338 Gene3D DnaJ domain 3 127 IPR036869 -
Pte19g00965 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Pte19g00965 338 Gene3D - 162 240 - -
Pte19g00965 338 SUPERFAMILY Chaperone J-domain 3 125 IPR036869 -
Pte19g00965 338 Pfam DnaJ domain 4 67 IPR001623 -
Pte19g00965 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pte19g00965 338 FunFam Dnaj homolog subfamily b member 159 240 - -
Pte19g00965 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 163 242 IPR008971 GO:0006457|GO:0051082
Pte19g00965 338 CDD DnaJ_C 161 324 - -
Pte19g00965 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pte19g00965 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pte19g00965 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pte19g00965 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pte19g00965 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pte19g00965 338 SMART dnaj_3 3 62 IPR001623 -
Pte19g00965 338 FunFam DnaJ subfamily B member 13 3 123 - -
Pte19g00965 338 FunFam DnaJ subfamily B member 13 242 322 - -
Pte19g00965 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00965 Pte-Chr19 8446039 8447693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00965 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 2.24e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00965 K09510 - qsa:O6P43_031876 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00965 19 8446039 8447693 Pte19g00965 19 8446039 8447693 RCT