Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00955 ATGGAAGAAACCAGAATGTGGTTAAGTACAGTTGAAACTCCTGAAGAAGCAGCAGCGCTTGCCTATGACGGCGCTGCTCGTTCACTGCGTGGAACCAAAGCCAAAACCAATTTCCACCTGTCGACAATGCTGGCGGCTTCCTTGCCCCGATACCATATCCCTGATGGCATGCTGTTCCTCAGGATGGGTTCATGCTTAGCGAGTTTATTCAATCAGGTCAAAGAAAATGCGGCTGGCGATTCACAATAG 249 0.494 MEETRMWLSTVETPEEAAALAYDGAARSLRGTKAKTNFHLSTMLAASLPRYHIPDGMLFLRMGSCLASLFNQVKENAAGDSQ* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00955 82 Gene3D AP2/ERF domain 1 41 IPR036955 GO:0003700|GO:0006355
Pte19g00955 82 PANTHER DNA-BINDING DOMAIN 3 46 IPR044808 GO:0003700|GO:0009873
Pte19g00955 82 SUPERFAMILY DNA-binding domain 3 41 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00955 Pte-Chr19 8384263 8385119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00955 2 38 AP2-EREBP Transcription Factor Family AT1G28360 75.676 2.43e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00955 - - oeu:111392889 58.5362