Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00951 ATGGCTGATTTTTCAGCTTCCAAGGAGTATGTTGCTGGCTTGCTTGCTGGCGTTTCTACTGTCATTGTTGGCCACCCTTTTGACACTGTCAAGGTGAAGCTGCAAAAGTACAATACTGACGTCCATGGAATTAAGTATAGTAGTGGTTTGCAATGTACGGCTCGGATACTGAAGACTGAAGGGGTTAAAGGACTTTACAGAGGAGCATCATCATCTTTTGTTGGTGTGGCTTTTGAGAGTTCCGTTCTTTTTGGCATTTATTCCCGGACAAAACTCCACCTACAGGGAGGTTCTCAAAGTAGTTCTCCTTCTCCCGAGGTAATAATACCATCTGCAGCTTATGGAGGTGCTCTAATAAGTTTTATCTTATGTCCATCAGAACTGGTAAAGTGTAGGATGCAAATTCAGGGTGCAGACTCTTTGGTTCCAAGGTCCCAGAGATACAGTAGTTCCCTTGACTGTGCAGTCAGGACGGTGAAGAATGAAGGAGTTAGAGGGATCTTTCGTGGAGGTTCTACAACGTTGCTTAGAGAATCTATTGGAAATTCTGTCTTTTTCAGCGTTTATGAATATATGCGTTATTACTTGCATTTGCACATGAAAGGTGCTCCGTCGAATTACAGCAACTTGATTGATATGGCAATTGGGATTGTAACTGGTGGTCTTGGTGGTGTAGCTTTTTGGTTGGCTGTTTTACCATTGGATGTGGCTAAAACTATAATTCAGACTTCTACGGAGAGAAGCTCAACAAGAAATCCTTTTCAAGTCTTAACCACGATTTACAGAAGAGGTGGAATTAAAGGATGCTATACAGGTCTGGGCCCTACGGTAGTCCGGGCATTTCCAGCTAATGCAGCAGCAATAGTAGCTTGGGAGCTGGCCTTGAAAGTCTTGGGCATTAGGTTTCTTCTGAATTAA 918 0.4314 MADFSASKEYVAGLLAGVSTVIVGHPFDTVKVKLQKYNTDVHGIKYSSGLQCTARILKTEGVKGLYRGASSSFVGVAFESSVLFGIYSRTKLHLQGGSQSSSPSPEVIIPSAAYGGALISFILCPSELVKCRMQIQGADSLVPRSQRYSSSLDCAVRTVKNEGVRGIFRGGSTTLLRESIGNSVFFSVYEYMRYYLHLHMKGAPSNYSNLIDMAIGIVTGGLGGVAFWLAVLPLDVAKTIIQTSTERSSTRNPFQVLTTIYRRGGIKGCYTGLGPTVVRAFPANAAAIVAWELALKVLGIRFLLN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00951 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 195 IPR018108 -
Pte19g00951 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 298 - -
Pte19g00951 305 Gene3D Mitochondrial carrier domain 2 113 IPR023395 -
Pte19g00951 305 Gene3D Mitochondrial carrier domain 114 300 IPR023395 -
Pte19g00951 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 93 IPR018108 -
Pte19g00951 305 FunFam Mitochondrial carrier protein 1 107 - -
Pte19g00951 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 297 IPR018108 -
Pte19g00951 305 FunFam Mitochondrial amino acid carrier 178 302 - -
Pte19g00951 305 SUPERFAMILY Mitochondrial carrier 5 292 IPR023395 -
Pte19g00951 305 Pfam Mitochondrial carrier protein 216 298 IPR018108 -
Pte19g00951 305 Pfam Mitochondrial carrier protein 111 196 IPR018108 -
Pte19g00951 305 Pfam Mitochondrial carrier protein 5 95 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00951 Pte-Chr19 8346764 8350253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00951 24 298 Antiporters AT1G79900 31.010 1.16e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00951 K15109 - cave:132168778 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00951 19 8346764 8350253 Pte19g00951 19 8346764 8350253 RCT