Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00948 ATGGCGGATTTACCTGGAAAAAAGAAAGGAAAAACCATGGAGGAAAGTGATAACTCTTGGCTGAGAAGAACCACTTTCTCTCACACCGTTTGTCATAGGTCGGACTCTACTCTATTAGGCTCCATTTCTTTCACTATTAAACAAAAGAGGATTTCAGGTGCGAAATCAAGGCGAGGAGGAGATTCCTGCAATCAGAAACCACATAGGCTTAATAAAGAATCTGAAAAGGGTCTTACGACGAAGGTGTCCTACAAAAATAATAAGCCCCCAGATTATAAGTCATACTCCACTTCCATTGCCCTTATGCAGTTCCCTTTCACGAACGTTTATGAGAAATCAATGACCTGGAAGGATTCATCATGGAGAAAATATTTTGACAGTGGTGAAGGAAGAGTTACTGCAGTAGAAACAGCTGAAGAACACACTGTTGATCTCTCCCAGCTCTTTCTTGGACTAAGGTTCGCTCATGGGGCTCATAGCCGGCTTTACCATGGCATGTATAAAGATGAAGCAGTAGCAGTTAAGATTATCACAGTACCAGATGATGACGCCGATGGAAATTTGGCTGCTCGTTTGGAGAAACAATATAATACTGAAGTCTCTCTTCTATCTCGTATGCACCATCAAAATGTCATAAAGTTTGTGGCGGCACGCAGACAGCCGCCTTGTTATTGTGTTATCATGGAATATCTATCTGAGGGTTCCTTGAGAGCATATCTGCATAAGTTAGAGAACAAATCTCTCCCATTGCAGAAATTAATAGCATTTGGCCTTGACATTGCTCGCGGCATGGAATACATACACTCTCGAGGTGTCATCCACAGAGACCTTAAACCAGAGAATATCCTCATTGATGAGAATTCCCACCTAAAGATTGCTGATTTTGGAATTGCTTGTGAGGACACACACTCTGAAGTTTTAGCTGACGATTCTGGAACATACCGATGGATGGCACCTGAGATGATTAAGCACAAATCATGTGGAAGAAAAGTGGATGTATACAGCTTCGGGCTAATACTGTGGGAGATGGTTGCCGGCACCATACCATATGAAGATATGAATCCAATACAGGCTGCTTATGCTGTTGTCAATAAGAACATGAGACCTGTCATCCCATCAAAATGTCCACATGTTCTGCGAGCTTTGATTGAGCAATGCTGGTCCTTGCAGCCAGAGAAGAGACCTGACTTCTGGCAAATTGTTGAAGTATTAGAGCAATTTGAATCTTCAGTTGCTCGTGATGGCACCCTGAATTTTGTGCAAACCCTTTGCTTCCAAGATTATAAGAAAGGGCTTCTTCAAAGGATTCACAAGATCGGTCCAATGCCCAAACCAAAATTCTCATGA 1347 0.4232 MADLPGKKKGKTMEESDNSWLRRTTFSHTVCHRSDSTLLGSISFTIKQKRISGAKSRRGGDSCNQKPHRLNKESEKGLTTKVSYKNNKPPDYKSYSTSIALMQFPFTNVYEKSMTWKDSSWRKYFDSGEGRVTAVETAEEHTVDLSQLFLGLRFAHGAHSRLYHGMYKDEAVAVKIITVPDDDADGNLAARLEKQYNTEVSLLSRMHHQNVIKFVAARRQPPCYCVIMEYLSEGSLRAYLHKLENKSLPLQKLIAFGLDIARGMEYIHSRGVIHRDLKPENILIDENSHLKIADFGIACEDTHSEVLADDSGTYRWMAPEMIKHKSCGRKVDVYSFGLILWEMVAGTIPYEDMNPIQAAYAVVNKNMRPVIPSKCPHVLRALIEQCWSLQPEKRPDFWQIVEVLEQFESSVARDGTLNFVQTLCFQDYKKGLLQRIHKIGPMPKPKFS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00948 448 PRINTS Tyrosine kinase catalytic domain signature 312 322 IPR001245 GO:0004672|GO:0006468
Pte19g00948 448 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Pte19g00948 448 PRINTS Tyrosine kinase catalytic domain signature 375 397 IPR001245 GO:0004672|GO:0006468
Pte19g00948 448 PRINTS Tyrosine kinase catalytic domain signature 228 241 IPR001245 GO:0004672|GO:0006468
Pte19g00948 448 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Pte19g00948 448 Gene3D Phosphorylase Kinase; domain 1 136 232 - -
Pte19g00948 448 CDD STKc_MAP3K-like 155 404 - -
Pte19g00948 448 MobiDBLite consensus disorder prediction 61 79 - -
Pte19g00948 448 Gene3D Transferase(Phosphotransferase) domain 1 233 430 - -
Pte19g00948 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Pte19g00948 448 MobiDBLite consensus disorder prediction 50 85 - -
Pte19g00948 448 Pfam Protein tyrosine and serine/threonine kinase 154 404 IPR001245 GO:0004672|GO:0006468
Pte19g00948 448 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 128 411 - -
Pte19g00948 448 SUPERFAMILY Protein kinase-like (PK-like) 128 404 IPR011009 -
Pte19g00948 448 SMART serkin_6 148 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00948 448 ProSiteProfiles Protein kinase domain profile. 121 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00948 448 FunFam serine/threonine-protein kinase HT1 233 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00948 Pte-Chr19 8333786 8335717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00948 67 449 MAP Kinase Kinase Kinase AT5G58950 59.901 4.58e-174 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte19g00948 PK_Tyr_Ser-Thr 7.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00948 - - qsa:O6P43_031847 589.341