Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00946 ATGGTCGGAGCTTTTGATGTTGGAGCTGTTCCTTTCAACCCCGACGGATGGGGTCCGATGGACTCCTCCACCGGAACAACCACTCTCTCTAATCTACCATTGAACGTCCCGTTCGCGCCATTCTCTCGTTCCGATAAGCTGGGTCGAATTGCCGATTGGACTCGCAACTTTAACAACCCTACCAGATCCAAAAACCCATCTGATGCCGTCTTCGACTTCTCAAACGACGATTCATTCCCTCTCTCTGCTGAAGACGACGCGTCGTTTCGTCTCGTCGACGGTAAGCCACCGCCGAGACCCAAGTTTGGACCCAAATGGCGGTTCCAGCAACAACGACAACTCCCTCAGCGCCGTGATGAAGAAGTGGAAGCTCGAAAGCGTGAAGCTGAGAAGGAACGCGCCCGTCGGGATCGTCTCTACAATCTTAACCGTTCCAATGCTAACAACAATCGTCGTGAAGCTGCGGTTTTCAAATCCTCCGTTGATATCCAACCCGAGTGGAACATGTTGGATCAGATTCCCTTCTCAACATTCTCCAAGCTCTCCTTTTCGGTACCTGAACCCGAGGATCTCATGCTGTGTGGTGCACTTGAGTATTACGACAGGGCTTACGACCGAATCACACCCAAGAATGAACGCAGACTTGAGAGGTTTAAGAATAGGAACTTCTTCAAGGTTACAACTACTGATGACCCAGTTATTCGTAAGCTCGCTAACGAAGATAAGGCTACTGTTTTTGCTACTGACACAATACTTTCAACACTTATGTGTGCACCTAGGTCGGTGTACTCATGGGATATCGTTGTTCAGAGAGTTGGGAACAAGTTGTTTTTTGATAAGAGAGACGGGTCTCAGTTGGATTTACTTTCTGTCCATGAGACTTCACAAGAGCCATTACCTGAAGCTAAAGATGACATTAACTCTGCATATTCATTAAGTGTGGAGGCCGCTTATATTAATCAGAATTTCTCACAGCAAGTTTTGGTAAGGGATGGGAATAAGGTCACTTTTGATGAGCCAAATCCGTTTGCTAACGAGGGTGAGGAGGTTGCCTCTGTGGGATATCGGTACAGGAGGTGGAAGCTTGATGATGATATGTATTTGGTTGCTAGGTGTGAGGTTCATAGTGTCGTTGATCTAAATAAGCAAAGGTCGTTCCTTACCTTGAATGCATTGAATGAATTTGATCCCAAGTATTCAGGTGTTGATTGGAGGCAAAAATTGGAGACTCAGAGGGGTGCAGTATTGGCTACTGAGCTGAAGAATAATGCCAACAAATTAGCTAAATGGACTGCTCAAGCTCTATTGGCTAGTGCTGATATGATGAAGTTGGGCTATGTCTCCAGGGTTCACCCTCGCGATCACTTTAATCATGTGATTTTGGCTGTGGTTGGATATAAGCCCCGAGATTTTTCTACTCAAATTAATTTGAACACCTTGAATATGTGGGGTATTGTGAAATCCATCGTGGATTTGTGTATGAAATTGAATGAGGGGAAGTATGTTTTGGTGAAGGATCCATCAAAGCCCCAGGTTAGGATCTATGAGGTTCCAGCTGATGCTTTTGAAAATGATTATGTGGAGGAACCCCTGCCAGAGGACGAACAAGTTCAACCACCAACAGAGGACACTGAAGGTGGCGAGACAGCTGCTACAAAAAATGATACAGAGGAAAAAGAGACTAATGGTCATGCTTAA 1698 0.457 MVGAFDVGAVPFNPDGWGPMDSSTGTTTLSNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPSDAVFDFSNDDSFPLSAEDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNANNNRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLSFSVPEPEDLMLCGALEYYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRKLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFDEPNPFANEGEEVASVGYRYRRWKLDDDMYLVARCEVHSVVDLNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPRDFSTQINLNTLNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPTEDTEGGETAATKNDTEEKETNGHA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00946 565 PIRSF Transl_init_eIF3d 1 546 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pte19g00946 565 Coils Coil 117 137 - -
Pte19g00946 565 MobiDBLite consensus disorder prediction 87 134 - -
Pte19g00946 565 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pte19g00946 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 539 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pte19g00946 565 MobiDBLite consensus disorder prediction 112 134 - -
Pte19g00946 565 MobiDBLite consensus disorder prediction 525 565 - -
Pte19g00946 565 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 528 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pte19g00946 565 MobiDBLite consensus disorder prediction 548 565 - -
Pte19g00946 565 MobiDBLite consensus disorder prediction 525 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00946 Pte-Chr19 8319273 8324818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00946 4 566 Eukaryotic Initiation Factors Gene Family AT4G20980 78.231 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00946 K03251 - gmx:100799613 998.038