Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00941 ATGGGCCTTTCCAGTCTTCCAGCACCATCTGAAGGTGTGCTATGTGTTATCTTGGTAAACGCTGCCCTTTCTATATCCATTTTTAAAGGTATTGTCCGATCGATCCTTCACATTGTCGGCATCCGTCTCTTGTCTTCATCAACTGCACCTCCCTCGTCCGATGTCTCTTCATACCCACCAGAGTCAATCGAGTTCCGTCTAACCCCATCTAATACTTACATTGAAGAGTTCAAAAGCAGTACACCCACCATTAGATTCGATTCAGTTCCTTGCTGTAAACGAGCAGACCATGACTGCTCAGTCTGCTTAACGCCATTTAAACCCGAGGCCGAAATCAACAAGTTATCTTGTGGGCATCTCTTTCACAAGGTATGCTTGGAGGGGTGGTTAGACTATTGGAACATAACTTGCCCACTTTGCAGGAAACCCTTGATGCCTGAAGAAGAAGCTACCTGCTTTTGGTGA 465 0.4581 MGLSSLPAPSEGVLCVILVNAALSISIFKGIVRSILHIVGIRLLSSSTAPPSSDVSSYPPESIEFRLTPSNTYIEEFKSSTPTIRFDSVPCCKRADHDCSVCLTPFKPEAEINKLSCGHLFHKVCLEGWLDYWNITCPLCRKPLMPEEEATCFW* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00941 154 SUPERFAMILY RING/U-box 98 146 - -
Pte19g00941 154 PANTHER - 1 153 IPR044249 -
Pte19g00941 154 SMART ring_2 99 140 IPR001841 -
Pte19g00941 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 146 IPR013083 -
Pte19g00941 154 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Pte19g00941 154 Pfam Ring finger domain 98 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00941 Pte-Chr19 8278232 8280464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00941 1 150 C3H Transcription Factor Family AT2G04240 61.538 1.41e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00941 K16285 - gmx:100786803 244.202