Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00938 ATGGACGGTGAAGGAAGAAATGGCTTGATTCAAGGACAGCAAAGCCAAGAGCTTCTGCAGCTGCAGCAGCAGCCTCAGAGATGTCCTCGATGTGATTCTCTGAACACCAAGTTCTGCTACTTCAACAACTACAGCCAGTCTCAGCCTCGCTATTTCTGCAAGGCATGTAGAAGGTACTGGACTCAAGGTGGAACCTTGAGGAATGTACCAATTGGCGGTAGCTGCCGCAAGGGAAAGCGCGCCAGACTGGAGTCATCTTCGGGAGAAGCTGTGAGATCACTGGCTGCAGCTCCAATAGCACCAGCCCCAAATCAGCCATCACCAGCTCCACTGCAGCCTGCACAGTTTCAAGCAACTTTGACATCAGCCTCACCAAATGTTGTTCCTTCAAATCCTGTTCTAGGGATTAGAGAATCAGGACCTACAGTTCCAGCTTTTGGTGTGGCTCCAACAATGCATATGGCATCCTACTATCCCGGTGAGGATGGCTATCTGTCTTCTTTGCTATCTAATACCAAGTCGCTGAGTGTGGGAAGTAATGCTGCAGGAACATCTAATTTCATTGCCATGCCTGGCTTCTATGTCCAGCCTTTGAGCTATGAGCAGCAGCAGCAGCAGCGCCAGATTCGACAAGAGCAGTTTTATCAGATGGATAACAGAGAGAGGAGCATTGATGCAATGTATCCGAGACAACATGGTTTAGCTCAATCTGGCATGCCTGCTGGTGGCTCTGCTTATCAGCTTTATTTGTCACAGAACTTCATGAATGATGCTAACCACTCTGGTTCTGTCTCTAATGCCTCTGCCGGGTCTTCTTTGGACCCTAATCAATCGCCTAGAATGCCAGAATATGACCCTTCTCCCTAG 867 0.489 MDGEGRNGLIQGQQSQELLQLQQQPQRCPRCDSLNTKFCYFNNYSQSQPRYFCKACRRYWTQGGTLRNVPIGGSCRKGKRARLESSSGEAVRSLAAAPIAPAPNQPSPAPLQPAQFQATLTSASPNVVPSNPVLGIRESGPTVPAFGVAPTMHMASYYPGEDGYLSSLLSNTKSLSVGSNAAGTSNFIAMPGFYVQPLSYEQQQQQRQIRQEQFYQMDNRERSIDAMYPRQHGLAQSGMPAGGSAYQLYLSQNFMNDANHSGSVSNASAGSSLDPNQSPRMPEYDPSP* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00938 288 MobiDBLite consensus disorder prediction 259 288 - -
Pte19g00938 288 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 202 IPR045174 GO:0003700|GO:0006355
Pte19g00938 288 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Pte19g00938 288 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Pte19g00938 288 MobiDBLite consensus disorder prediction 259 278 - -
Pte19g00938 288 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00938 Pte-Chr19 8233596 8235553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00938 27 98 C2C2-Dof Transcription Factor Family AT5G60200 69.444 2.18e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte19g00938 zf-Dof 8.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00938 - - qsu:112029439 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00938 19 8233596 8235553 Pte19g00938 19 8233596 8235553 RCT