Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00937 ATGGTTTCAACGACTAGGGTGATGGAGAGAACAGGACAAGAACTGCAGCAGCAGCAACACCAACAAGAAGCCCTCAAGTGTCCTCGTTGTGATTCATCAAACACAAAGTTCTGCTACTACAACAATTATAGCTTGTCTCAACCCAGACACTTCTGCAAAGCTTGTAAGAGATATTGGACAAGAGGAGGAACACTTAGGAATGTTCCTGTTGGTGGTGGGTGCAGGAAAAACAAACGCATCAAGAGGCCTAACTCCTCTCCTGCTGATGGGGCTGTGTGTACTTCTTCTGCAAATTCAGTTCCTCTTGCTAATACGAACACTACTTCTGATACACAGTTCGATGCATCTTCAGCTGCAAACCATGTAAATCCTTTGCTTTATGGTTTGTCCAATAACCCTTGTTATATGAATCTCCCATTTTACAGGCTCAATTCTAGAGTCTCTAGTGTGGACAGTACTGTTCCTTGTTATGATCTTCAGCCACAGCTACATGCCCTTGGATTAGCTTTCTCACCGAGAGTTTGTGAAACTGACAATCAAAACGGGTTGAAGTGTAACCCCACTAATCAAAATCATGACATGGTTGCATCTTACGGTCCATATCTCTCTAATTATTTTGGTGGTTCAACTTCTACAAGGACTACACCTATTGTGGCTTCTTTGCTTACTTCAACTTTGCAGCAACAGAAATTCCTCACGAAAGATAGTCCACTCAGTAACAATTTCCATGGCTTGCCACCATTTGAAGAGCTGCAAATTTCAGGATCCAATTATGGAGGAAGTCAGACCAATGGGTTGGCGCCTTCGCAAGAAGTCAAAGTTGAACAAGGTAAAAGTAGAATAGACTGGAATGCTTTTAATTACGAGAGTGAGATGGAGCAAGTTGGCATGCCTGAGCCTGACCCTTCATTTTATTGGAACACAGCAACAACTATGGGTACTTGGAATGATCAACCAAACACTGGTCCTTCAGTTACTTCACTCATCTAG 990 0.4273 MVSTTRVMERTGQELQQQQHQQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIKRPNSSPADGAVCTSSANSVPLANTNTTSDTQFDASSAANHVNPLLYGLSNNPCYMNLPFYRLNSRVSSVDSTVPCYDLQPQLHALGLAFSPRVCETDNQNGLKCNPTNQNHDMVASYGPYLSNYFGGSTSTRTTPIVASLLTSTLQQQKFLTKDSPLSNNFHGLPPFEELQISGSNYGGSQTNGLAPSQEVKVEQGKSRIDWNAFNYESEMEQVGMPEPDPSFYWNTATTMGTWNDQPNTGPSVTSLI* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00937 329 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Pte19g00937 329 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Pte19g00937 329 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Pte19g00937 329 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 208 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00937 Pte-Chr19 8218855 8221045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00937 25 330 C2C2-Dof Transcription Factor Family AT1G28310 39.009 1.48e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte19g00937 zf-Dof 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00937 - - qsa:O6P43_031858 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00937 19 8218855 8221045 Pte19g00937 19 8218855 8221045 RCT