Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00935 ATGAAGGTTATGACAGCAGGCCAGAAAGTACTGTTTGAGTATCACGGAAACAACTATTCATTTACAGTCACTCAAGCAGCTCTTGAGGATGAAGATAAGTCTGGTACTATTGAAAGAGGGATGATTACAGACGACACATATATTGTCTTTGAAGCATCTCGTGACACTGGAATACAGATTGTTAATGGTCCTGAAGTATTGAGCAAATTCGTTGGTGAAACTGAGAAGAATGTTCGAGACCTATTTGCAGATGCTGAGCAAGATCAGAAGACTCATGGAGACCAAAGTGATTTGCATGTCATAATTTTTGATGAAATTGATGCTATCTGCAAGGTAAAAGATGTACATCCTTGA 354 0.387 MKVMTAGQKVLFEYHGNNYSFTVTQAALEDEDKSGTIERGMITDDTYIVFEASRDTGIQIVNGPEVLSKFVGETEKNVRDLFADAEQDQKTHGDQSDLHVIIFDEIDAICKVKDVHP* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00935 117 Gene3D - 61 111 IPR027417 -
Pte19g00935 117 Gene3D - 1 55 - -
Pte19g00935 117 Pfam ATPase family associated with various cellular activities (AAA) 59 113 IPR003959 GO:0005524|GO:0016887
Pte19g00935 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 112 IPR027417 -
Pte19g00935 117 SUPERFAMILY Cdc48 domain 2-like 3 63 IPR029067 -
Pte19g00935 117 PANTHER VESICULAR-FUSION PROTEIN NSF 2 59 IPR039812 GO:0016887|GO:0035494
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00935 Pte-Chr19 8109500 8111354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00935 61 113 Calmodulin-binding Proteins AT3G56690 43.396 5.56e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00935 K06027 - csin:114267103 168.318