Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00926 ATGAGTTGTAGCTGCTTTAGGGCCTCAGATGTGAAAAATAAGAGGAAGTCTTCTCAGCCTTCTCATGAAGTTGATGGCCTTCCACTTGATATTAAACAGTTCTCCATTAATGAATTAAAATCTGCAACAGATAACTTCCATTTAAGAAAAAAGATCGGACGAGGAGGATTTGGGATAGTTTACAAGGGGACCTTAAGAGATGGGCGTCAGGTTGCAGTGAAGAGACTTTCCGTTGGGTCAAAGCAGGGCACTCCTGAATTTTTGTCTGAAGTTAGTACTACATCAAATGTGAAACATCCTAACCTCGTTGAATTGATTGGCTGCTGTGCTGACGGATCTGACAGGGCGTTAGTGTATGAGTATGTGGAAAATAGCAGTCTTGATCGTGCATTACTAGGCTCAAAGGGTGAAAAAATCATCTTAGGGTGGAGAGAAAGATCTATAATTTGCTTGGGCACAGCTAAGGGTCTTGCATTCCTTCACGAAGAACTTGTGCCACATATTGTGCACCGAGACATCAAAGCTAGTAATATACTCCTTGATGAAAACTTTATCCCCAAAATTGGTGACTTTGGGTTGGCTAAACTCTTCCCAGAGGATATCACACACATCAGCACAAGAATTGCCGGTACAACTGGATATTTGGCTCCTGAATATGCCTTGGGTGGTAAGTTAACATTGAAAGCGGATGTCTACAGTTTCGGGGTTCTTGTGCTTGAAATAATTAGTGGAAGATGCAGTGCAAGATCAAACTGGGGAGGAATGTCAAAATTACTTCTAGAATGGGCTTGGCAGCTTCACGAAGAAGGGAAACTTTTGGAACTAGTGGATCCAGATATGGGAGAGTTTCCTGAGGAAGAAGTGCTTAGGTACATGAAGGTAGCTTTTTTCTGTACACAAGCAGCGGCTAGCCGGAGGCCACTGATGTCGCAGGTTGTTGATATGCTCTCCAGGAATATCCGGCTCAATGAGAAGGAAATAACAGCCCCTGGATATTTTCAAGATTTAGGAATCAGTGGAGAACCATCTTCGAAGAAGACATCCTTAGACTCTACTAGCTACAAACTTAGCTCTGTCCCTATGTCGATCACTAATGTGGCTCCACGATGA 1110 0.4306 MSCSCFRASDVKNKRKSSQPSHEVDGLPLDIKQFSINELKSATDNFHLRKKIGRGGFGIVYKGTLRDGRQVAVKRLSVGSKQGTPEFLSEVSTTSNVKHPNLVELIGCCADGSDRALVYEYVENSSLDRALLGSKGEKIILGWRERSIICLGTAKGLAFLHEELVPHIVHRDIKASNILLDENFIPKIGDFGLAKLFPEDITHISTRIAGTTGYLAPEYALGGKLTLKADVYSFGVLVLEIISGRCSARSNWGGMSKLLLEWAWQLHEEGKLLELVDPDMGEFPEEEVLRYMKVAFFCTQAAASRRPLMSQVVDMLSRNIRLNEKEITAPGYFQDLGISGEPSSKKTSLDSTSYKLSSVPMSITNVAPR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00926 369 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Pte19g00926 369 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Pte19g00926 369 Pfam Protein kinase domain 46 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00926 369 ProSiteProfiles Protein kinase domain profile. 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00926 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Pte19g00926 369 Gene3D Transferase(Phosphotransferase) domain 1 122 330 - -
Pte19g00926 369 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 341 - -
Pte19g00926 369 Gene3D Phosphorylase Kinase; domain 1 6 121 - -
Pte19g00926 369 SMART serkin_6 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00926 369 SUPERFAMILY Protein kinase-like (PK-like) 29 324 IPR011009 -
Pte19g00926 369 CDD STKc_IRAK 52 318 - -
Pte19g00926 369 FunFam receptor-like serine/threonine-protein kinase NCRK 21 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00926 Pte-Chr19 7957640 7963175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00926 11 358 Receptor kinase-like Gene Family AT1G56120 49.143 8.32e-110 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte19g00926 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00926 - - gmx:100775344 555.829