Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00922 ATGTTAGAGATGGGTCTGAGTTCTACGCAGGTGTCAAGTAAACGCCCTTCAATGAAGAGACAACCACATCATCAGCAACAAGCTTCTGAACCTTTGAAGTGTCCAAGATGTGATTCCACAAATACCAAGTTCTGTTACTTCAACAACTACAATGAGTCTCAGCCTCGCCATTACTGCAGAGCATGTAAAAGGCACTGGACTGAAGGTGGAACTCTTCGCAATGTTCCGGTTGGTGGTGGACGCAAGCACAGAAGAACAAAGAAAACCGCTGCTTCGCCAAATGTTGCTTCTGCAACTGCAACAAACGCTGACACAAGCACCATCACCATTAATCCAACTATCAGAGACAGAAAGCTAACTTCCCAAATGACTATTCAAACTTCACAGCAGATGCTGCATCTTCCCATAGTACCTGGGGATACTCAGAAAAGTTTTCTGTATCGACCACGGATTCATGAACCATCTTTGATGCCGCAATATGATCCAACAAACACTTTTGACTTAGAAGATAAGTTCTCTGTGGGGACCAAGGATAGTTTGTGCGTGGGGGCAAGTGATATGCTTTTGCAGCCACAAAGTCATTGCCTACAGTTTCCCTTCTCGAGATCAAGCTACTGTGAAATAAACTTGCCATCAATCCAAACTTCTTTTCCGTCCTCCAATATCTATGATCATGGTGAAGAGTTTAAAACCATTGACGAGCCAAGCATCGCCAGTATGATTATGTCCAGCACATGCGGTAATCATGCACAAACGTGGCAGTTACATATTCTGGACAGTAGCATGGACTTGCCGAATTCTTGGAATTGGGATGATGTCGATTCCCTGGTGTCAACTGATCTCAGTACGTCTCAGAAAGACACTGACGTAAAACCCTGA 879 0.4425 MLEMGLSSTQVSSKRPSMKRQPHHQQQASEPLKCPRCDSTNTKFCYFNNYNESQPRHYCRACKRHWTEGGTLRNVPVGGGRKHRRTKKTAASPNVASATATNADTSTITINPTIRDRKLTSQMTIQTSQQMLHLPIVPGDTQKSFLYRPRIHEPSLMPQYDPTNTFDLEDKFSVGTKDSLCVGASDMLLQPQSHCLQFPFSRSSYCEINLPSIQTSFPSSNIYDHGEEFKTIDEPSIASMIMSSTCGNHAQTWQLHILDSSMDLPNSWNWDDVDSLVSTDLSTSQKDTDVKP* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00922 292 Pfam Dof domain, zinc finger 31 85 IPR003851 GO:0003677|GO:0006355
Pte19g00922 292 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
Pte19g00922 292 MobiDBLite consensus disorder prediction 76 100 - -
Pte19g00922 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 183 IPR045174 GO:0003700|GO:0006355
Pte19g00922 292 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
Pte19g00922 292 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00922 Pte-Chr19 7892640 7893805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00922 21 93 C2C2-Dof Transcription Factor Family AT1G51700 61.644 7.49e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte19g00922 zf-Dof 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00922 - - jre:108980760 238.039