Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00919 ATGAGTTGTAGCTGCTTTAGGGCCTCAGATGTGAAAAATAAGAGGAAGTCTTCTCAGCCTTCTCATGAAGTTGATGATAACTTCCATTTAAGAAAAAAGATCGGACGAGGAGGATTTGGGATAGTTTACAAGGGGACCTTAAGAGATGGGCGTCAGGTTGCAGTGAAGAGACTTTCCGTTGGGTCAAAGCAGGGCACTCCTGAATTTTTGTCTGAAGTTAGTACTACATCAAATGTGAAACATCCTAACCTCGTTGAATTGATTGGCTGCTGTGCTGACGGATCTGACAGGGCGTTAGTGTATGAGTATGTGGAAAATAGCAGTCTTGATCGTGCATTACTAGGCTCAAAGGGTGAAAAAATCATCTTAGGGTGGAGAGAAAGATCTATAATTTGCTTGGGCACAGCTAAGGGTCTTGCATTCCTTCACGAAGAACTTGTGCCACATATTGTGCACCGAGACATCAAAGCTAGTAATATACTCCTTGATGAAAACTTTATCCCCAAAATTGGTGACTTTGGGTTGGCTAAACTCTTCCCAGAGGATATCACACACATCAGCACAAGAATTGCCGGTACAACTGGATATTTGGCTCCTGAATATGCCTTGGGTGGTAAGTTAACATTGAAAGCGGATGTCTACAGTTTCGGGGTTCTTGTGCTTGAAATAATTAGTGGAAGATGCAGTGCAAGATCAAACTGGGGAGGAATGTCAAAATTACTTCTAGAATGGGCTTGGCAGCTTCACGAAGAAGGGAAACTTTTGGAACTAGTGGATCCAGATATGGGAGAGTTTCCTGAGGAAGAAGTGCTTAGGTACATGAAGGTAGCTTTTTTCTGTACACAAGCAGCGGCTAGCCGGAGGCCACTGATGTCGCAGGTTGTTGATATGCTCTCCAGGAATATCCGGCTCAATGAGAAGGAAATAACAGCCCCTGGATATTTTCAAGATTTAGGAATCAGTGGAGAACCATCTTCGAAGAAGACATCCTTAGACTCTACTAGCTACAAACTTAGCTCTGTCCCTATGTCGATCACTAATGTGGCTCCACGATGA 1056 0.4356 MSCSCFRASDVKNKRKSSQPSHEVDDNFHLRKKIGRGGFGIVYKGTLRDGRQVAVKRLSVGSKQGTPEFLSEVSTTSNVKHPNLVELIGCCADGSDRALVYEYVENSSLDRALLGSKGEKIILGWRERSIICLGTAKGLAFLHEELVPHIVHRDIKASNILLDENFIPKIGDFGLAKLFPEDITHISTRIAGTTGYLAPEYALGGKLTLKADVYSFGVLVLEIISGRCSARSNWGGMSKLLLEWAWQLHEEGKLLELVDPDMGEFPEEEVLRYMKVAFFCTQAAASRRPLMSQVVDMLSRNIRLNEKEITAPGYFQDLGISGEPSSKKTSLDSTSYKLSSVPMSITNVAPR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00919 351 SUPERFAMILY Protein kinase-like (PK-like) 19 306 IPR011009 -
Pte19g00919 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Pte19g00919 351 CDD STKc_IRAK 34 300 - -
Pte19g00919 351 FunFam Putative LRR receptor-like serine/threonine-protein kinase 104 310 - -
Pte19g00919 351 Gene3D Phosphorylase Kinase; domain 1 7 103 - -
Pte19g00919 351 ProSitePatterns Protein kinases ATP-binding region signature. 34 56 IPR017441 GO:0005524
Pte19g00919 351 PIRSF TyrPK_CSF1-R 24 109 - -
Pte19g00919 351 PIRSF TyrPK_CSF1-R 131 343 - -
Pte19g00919 351 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 323 - -
Pte19g00919 351 Pfam Protein kinase domain 28 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00919 351 SMART serkin_6 28 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00919 351 Gene3D Transferase(Phosphotransferase) domain 1 104 312 - -
Pte19g00919 351 ProSiteProfiles Protein kinase domain profile. 28 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00919 Pte-Chr19 7813785 7818306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00919 10 340 Receptor kinase-like Gene Family AT1G56120 49.245 6.88e-104 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte19g00919 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00919 - - gmx:100775344 528.48