LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte19g00881	ATGACGTCGTATCATCAACCTGAGCTGGACTCCGCCACCACTGACTCCTTAGCCTCCTCTCCTCGCTCAGACTGTCAGCCTCATGATCCCCTTTCTCGTGTAAGATTCATGTGCAGCTTTGGTGGCAATATTCTTCCCAGACCTCATGATAACCAGCTTCGTTATGTGGGTGGAACGAACAATATAACGTTAAAGTACCAGCTTCCCAACGAAGATCTGGACGCCTTGATTTCAGTGACGACAGACGAGGATGTCGAGAACATGATAGACGAGATTGACCGCTTAGCACAGAATCAAAACCCGAGGTCAACAGCGAGGCTTCGTCTCTTTCTGTTTCCCAAAGGTGAAGACTACTCAAGAGCGAGCAGCACCATCAGCTCTCTGCTTGGTGGTTCAGCTAACCGTGAGAGCTGGTTCGTTGATGCTCTCAACAGTCGTGGACTCGAACGTGGCCGCTCTGAAGCTTCGTCCATGGTGTCCGAGGTACCCGATTATCTTTTCGGGTTGGATCATTCGGATGAGACCCAGCCACAGCGTTTGGCTGAGTTCAAAGTACCCAAGTCGAAACTTGCTGTTCAGGATAACGTCTCGATGTCGGATCCAGGTTCACCAGCTCCGGTGGCGTCATCCCCGTACGGTTCCACTTCTTCTGCGTTCACTCCATGCATTCCGCCGATACCTAATCTTCCACCGGTAAAGACTAAACCCGATAGCCCCGTGAAAGAAGTCAACCAAGCTGAGGCTTTGGCTGAGACAGTTTTCGAACCACAACCAACTTTGCCGATGAGCAACAACCATGTCATCCAATACCAAAACCCTGATTCTGCTTATTCAGGTTATTCTGCACAACCCATGCCTATGTACTATGTTCCCGGTCCAGTTCAACCCGGAAGAATGCCAGTCCAACCCGTTTCAGCACAGGGTACATACGTCCAAACATACCCAGTGGTCTCGGGTCAGGTACCAGTTGGGTACCAGTACCACCATTTGGTTTCGGGTGTGAGCCAAGTGTATGGTGGAGAAGTGAGACCTGGTGGTGTGAACCCATACGATGCATCAGTGAGGGTGGTTCCAACCAGCAACAACCAACAAGTGTACTATGGGGTCGGAAGCTCGGGCCAAATTGCAGCTTATCCGGTCATGATGGTGCCTGGTGGGTCCCAAGAATCCCAACGGACCGGGTCTGAAATTAACATCGGCCGGATTCCTCAATGA	1215	0.5119	MTSYHQPELDSATTDSLASSPRSDCQPHDPLSRVRFMCSFGGNILPRPHDNQLRYVGGTNNITLKYQLPNEDLDALISVTTDEDVENMIDEIDRLAQNQNPRSTARLRLFLFPKGEDYSRASSTISSLLGGSANRESWFVDALNSRGLERGRSEASSMVSEVPDYLFGLDHSDETQPQRLAEFKVPKSKLAVQDNVSMSDPGSPAPVASSPYGSTSSAFTPCIPPIPNLPPVKTKPDSPVKEVNQAEALAETVFEPQPTLPMSNNHVIQYQNPDSAYSGYSAQPMPMYYVPGPVQPGRMPVQPVSAQGTYVQTYPVVSGQVPVGYQYHHLVSGVSQVYGGEVRPGGVNPYDASVRVVPTSNNQQVYYGVGSSGQIAAYPVMMVPGGSQESQRTGSEINIGRIPQ*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte19g00881	404	CDD	PB1_UP2	37	112	-	-
	Pte19g00881	404	SMART	PB1_new	33	114	IPR000270	GO:0005515
	Pte19g00881	404	MobiDBLite	consensus disorder prediction	1	26	-	-
	Pte19g00881	404	Pfam	PB1 domain	61	114	IPR000270	GO:0005515
	Pte19g00881	404	SUPERFAMILY	CAD & PB1 domains	50	118	-	-
	Pte19g00881	404	MobiDBLite	consensus disorder prediction	1	28	-	-
	Pte19g00881	404	MobiDBLite	consensus disorder prediction	195	214	-	-
	Pte19g00881	404	PANTHER	OS05G0427100 PROTEIN-RELATED	14	62	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte19g00881	Pte-Chr19	7445643	7447018	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte19g00881	32	292	MAP Kinase Kinase Kinase	AT1G79570	30.241	7.67e-21	93.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte19g00881	-		-	pvy:116134782	429.483