Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00875 ATGGAACGTTTCGCTAATAACTTCCATCACTCAACCCAAATTGTCTTCCTCATTTTACTTTGCCTGTTTCCCACACTTTCCTTCTCCCTTGACTCCTTAACTCCAACCCAACTCCTCACAGCTAACCAGACGCTTATATCTCCTAGTCAAATTTTTGAGCTGGGATATTTCTCATCAAGTGATTCCAGGTGGTATCTTGGTATATGGTACAAGAACGTTCCTCAAAAGACATATGCTTGGGTTGCAAACAGAGACATTCCACTTGGAAATTCATCTGGAATTTTCAGGATTGGTGATGATAATGGAACCATCGTCCTGCTTGATCAATCAGGGAACAGAATTTGGTCCTCAAAGTTTCAAACTGTAGCTTCAAATCCAGTTGTTCAGCTCTTGGATACAGGAAATTTAGTTGTGTATGAAGCAAACGAAGCTAACCCCACTAATTTTATTTGGCAGAGCTTTGATTATCCAACCGATACTCTCTTACCTGGTATGACACTAGGATGGAACCTTGACACCGGCACAGAAAGGTATATATCATCCTGGAAAAGCCAAAGTGATCCTGGAACAGGAGATTATGCTTTCAAACTAGATTCTCATGGATTCCCAGAAGTTTTCTTATGGGATAGGCAAGACAAGATTTACAGAAGTGGTCCTTGGAATGGTATGAGGTTCAGTGGCGTACCAGAAATGCAACCTGCCGATAATGGTATTAACTTTAGTTTCGTTACAAATGCACATCAGGTGTATTACACATTTGCAATTCCAAACAAGTTTTCGTTTTCAAGATTGTCTGTCAATTCTTCTGGTTACCTTCAACGCTATACATGGATTGAAAGCAGCAAGACATGGAACTTGTTTTGGTACGCACCAAAAGATCAATGTGATGAGTACAGAGGGTGTGGTCCGTTTGGGGTGTGTGACCCAAATGCTTCACCAGTATGCAAGTGTATGACAGGTTTTTCTCCCAAGAATTTACAAGCATGGAATCTGAGAGATGGCTCTGATGGATGCGTCAGAAATACAAGATTGGAATGTCAGACGGATAAGTTTCTGTTTGTCAATGGCATCAAATTGCCTGAGTCAACCACATCATTTGTGAACAGAAGCATGGACATTAATGATTGTAGAAACTTGTGTTTGAAGAACTGTTCTTGCACTGCTTATGCTAACGCTGACATTAGAAACGGAGGGACTGGGTGTGTCATATGGACTGGAGACCTCTTCGATGTCCGGCAATATGCAGAAGGTGGCCAAGATCTCTATGTCAGATTAGCAGCTTCTGAGATAAATAATGCAGGCTCTCAAACTGGAGGTGACAACCATCAAATCAAGACTGTAGGCGTTGTAGTTGGTGTAGGTGCAGCAGTACTAGTTGCATCAATAAGTATATGCATTTTGTGGAAGAGAAAGACTTTGCATCATCTATGCGCCAAAAAACAAGATCAGACAGGGTTACAAGGAAGGAGTCAGGAGTTTTTGATGAGTGAGGTGGTTATCTCAAGAAAGAGAGAATTCTCTGGTGAAAGAAACCAAGATGACCTGGAGTTGCCTTTGTTTGATTTCAATACTCTAGCCATGGCTACCAACAAATTTTCTGAACAAAACAAACTGGGACAAGGTGGCTTTGGTATTGTATACAGGGGTACGTTAGTGGAAGGCCAAGAGATTGCAGTGAAGAGGCTGTCACAAAAATCAACTCAGGGAACTGAAGAATTCAAGAATGAGGTTCAGTTGATTGTAAGACTTCAACACAGAAATCTTGTCAGGCTTCTTGGTTGCTGCATTGAGATGGATGAGAAGATGCTCATCTATGAATACCTGGAAAATAGGAGCCTTGATGGAATTCTATTTGATATAGCGAAAAGGTCTTTACTCAATTGGCCAAGACGCTTCAACATTATATGTGGTATAGCAAGAGGGCTTCTATATCTACACCAAGATTCGAGATTTAGAATCATCCATAGAGATTTGAAGGCAAGCAATATTCTACTTGACGGAGATCTCAACCCTAAAATATCAGATTTTGGGATGGCCAGAATATTTGGCACTGATCAGACTGAAGCAAATACAAAAAGGGTCGTTGGAACATATGGCTACATGTCTCCTGAATATGCTATGGATGGTCTGTTCTCAGTGAAATCTGATGTGTTCAGCTTTGGGGTTCTGGTACTGGAGATCATCAGTGGCAAGAAGAATAGAGGGTTTTATTATGAGAACGACGAGTTAAATCTTTCAGGACTTGCATGGACACTGTGGAAAGAAGGGAAGGAGTTAGAGTTGTTAGATGCATCAATTGGTGACTCGTGTTCTTCGCCATCAGAAGTATTGAGATGCATACAGGTTGGACTATTATGTGTCCAAGAGCGAGCTGAAGATAGACCCACAATGTCAACAGTAGTGCTCATGCTGAGTAGTGAAACTGTAAATATGCCACAGCCCAAAAACCCTGGCTTTTCTACGGGAAGAAATCATGTACAACCTGATTCTTCCTCGAGTAAGCAAGATGAATCATGCACTGTGAACCAAGTCACTGTGACTATGGTCGCTGGTAGGTAG 2559 0.415 MERFANNFHHSTQIVFLILLCLFPTLSFSLDSLTPTQLLTANQTLISPSQIFELGYFSSSDSRWYLGIWYKNVPQKTYAWVANRDIPLGNSSGIFRIGDDNGTIVLLDQSGNRIWSSKFQTVASNPVVQLLDTGNLVVYEANEANPTNFIWQSFDYPTDTLLPGMTLGWNLDTGTERYISSWKSQSDPGTGDYAFKLDSHGFPEVFLWDRQDKIYRSGPWNGMRFSGVPEMQPADNGINFSFVTNAHQVYYTFAIPNKFSFSRLSVNSSGYLQRYTWIESSKTWNLFWYAPKDQCDEYRGCGPFGVCDPNASPVCKCMTGFSPKNLQAWNLRDGSDGCVRNTRLECQTDKFLFVNGIKLPESTTSFVNRSMDINDCRNLCLKNCSCTAYANADIRNGGTGCVIWTGDLFDVRQYAEGGQDLYVRLAASEINNAGSQTGGDNHQIKTVGVVVGVGAAVLVASISICILWKRKTLHHLCAKKQDQTGLQGRSQEFLMSEVVISRKREFSGERNQDDLELPLFDFNTLAMATNKFSEQNKLGQGGFGIVYRGTLVEGQEIAVKRLSQKSTQGTEEFKNEVQLIVRLQHRNLVRLLGCCIEMDEKMLIYEYLENRSLDGILFDIAKRSLLNWPRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDGDLNPKISDFGMARIFGTDQTEANTKRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIISGKKNRGFYYENDELNLSGLAWTLWKEGKELELLDASIGDSCSSPSEVLRCIQVGLLCVQERAEDRPTMSTVVLMLSSETVNMPQPKNPGFSTGRNHVQPDSSSSKQDESCTVNQVTVTMVAGR* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00875 852 CDD B_lectin 36 157 IPR001480 -
Pte19g00875 852 Gene3D Transferase(Phosphotransferase) domain 1 608 816 - -
Pte19g00875 852 CDD PAN_AP_plant 342 426 - -
Pte19g00875 852 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Pte19g00875 852 SUPERFAMILY Protein kinase-like (PK-like) 517 804 IPR011009 -
Pte19g00875 852 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Pte19g00875 852 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 795 - -
Pte19g00875 852 Pfam Receptor serine/threonine kinase 487 522 IPR022126 GO:0004674
Pte19g00875 852 CDD STKc_IRAK 538 804 - -
Pte19g00875 852 PIRSF SRK 4 852 IPR024171 GO:0004674
Pte19g00875 852 Pfam Domain of unknown function (DUF3403) 806 852 IPR021820 GO:0004674
Pte19g00875 852 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Pte19g00875 852 Pfam PAN-like domain 346 411 IPR003609 -
Pte19g00875 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 188 IPR036426 -
Pte19g00875 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 608 812 - -
Pte19g00875 852 ProSiteProfiles Protein kinase domain profile. 532 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00875 852 Pfam D-mannose binding lectin 77 183 IPR001480 -
Pte19g00875 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Pte19g00875 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 496 607 - -
Pte19g00875 852 Pfam S-locus glycoprotein domain 215 325 IPR000858 GO:0048544
Pte19g00875 852 MobiDBLite consensus disorder prediction 812 840 - -
Pte19g00875 852 Pfam Protein tyrosine and serine/threonine kinase 535 802 IPR001245 GO:0004672|GO:0006468
Pte19g00875 852 Gene3D Phosphorylase Kinase; domain 1 507 607 - -
Pte19g00875 852 SMART blect_4 36 157 IPR001480 -
Pte19g00875 852 Gene3D - 27 154 IPR036426 -
Pte19g00875 852 Gene3D Hepatocyte Growth Factor 344 425 - -
Pte19g00875 852 SMART ntp_6 346 425 IPR003609 -
Pte19g00875 852 SMART serkin_6 532 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00875 Pte-Chr19 7378198 7382847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00875 509 848 Receptor kinase-like Gene Family AT4G23150 57.647 3.60e-130 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte19g00875 PK_Tyr_Ser-Thr 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00875 - - qsu:112010837 1170.22