Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00867 ATGGCAGCCGCGAGATTGGCATATACCTTAAGATCTGGAGGGAAGCGGGCTGCAAGTGAGACCCAGAATGATGGTATGGAGTCTAAGAGAGCCGTGAAGAAGACGAAGAAGGGAGATTATGAAAATGTTGAGGAAGATTTCATGAAGGCTGGAGATGATGGCAATAAACTTGTTCAGAGGGTTTGGGACGACGAACTTGCGGTTCTGAGAGGAATGCTCGAGTTTTCTTCCAATAAAGGAGCAGACCCGACGGCTGATATGAATGCGTTTCATGACTTCATCAAAAAGTCTTTGCATTTCGATGTTTCTAAAGTCCAGGTCTTTGATATGATACGAAGGTTGAAGAAGAAGTACGAGAGCAAAGTGAAGAGAGGTGGGGTTCCAACATTTAACAATCCCCACGAGAAGAAACTTTATGAATTGTCAAATAAAATCTGGGGTGATGAAGGTGTTAGTGATCAAATGGTAGCGAATAGTTTGAAGGAAAATGGTAGAGCTAAGCAGGACAAGAGCGAAGCTAAAAAGACTTTGGATGCATTGAAAGCCGAGCTTCTGCCACAGAAAGATAAGCAAATGGAGTGTCATCAGAATCAAGAAGGGACATTTTGTTTTAGTGGGTTGACTAGGTTCCAGAAGAGTTTGGGAATGGTTGGTATGGATGAGCAGGTGATAAAGAGAGGATTGGAACTTATGAATCCATTAAAAAGAGCAGAGTTTGAGAAGAGTTGGAAGGATGTATTGCAGAGTGAAATGGAGCTTGCTGCTAAGAGGGCACAAGTAACTATGGAGACAACTAGGGTGATGTGGGAGGCGTTTGGCTCTTCCAATAATTAA 834 0.4293 MAAARLAYTLRSGGKRAASETQNDGMESKRAVKKTKKGDYENVEEDFMKAGDDGNKLVQRVWDDELAVLRGMLEFSSNKGADPTADMNAFHDFIKKSLHFDVSKVQVFDMIRRLKKKYESKVKRGGVPTFNNPHEKKLYELSNKIWGDEGVSDQMVANSLKENGRAKQDKSEAKKTLDALKAELLPQKDKQMECHQNQEGTFCFSGLTRFQKSLGMVGMDEQVIKRGLELMNPLKRAEFEKSWKDVLQSEMELAAKRAQVTMETTRVMWEAFGSSNN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00867 277 Pfam Protein of unknown function, DUF573 59 147 IPR007592 GO:0006355
Pte19g00867 277 Coils Coil 163 183 - -
Pte19g00867 277 PANTHER BNAANNG10740D PROTEIN-RELATED 16 268 IPR007592 GO:0006355
Pte19g00867 277 MobiDBLite consensus disorder prediction 12 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00867 Pte-Chr19 7236171 7237952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00867 10 184 GeBP Transcription Factor Family AT4G00390 39.548 1.10e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte19g00867 DUF573 5e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00867 - - bhj:120073407 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00867 19 7236171 7237952 Pte19g00867 19 7236171 7237952 RCT