Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00865 ATGATCATGCTGAAGATCCACAAAAATGCTTGGCATCCATGGAGGTGCTCCCTTATTGTTAGTATCATCATTCTTCAGCTTCATCAATGCATCCATTCCGAGAAGCCTCTATTCATTTACCCTTCTTGTTCAGGCTCAGCTGATGACCCGATGACATCAACTCTTGGGGCAAACCTTGACGCACTGCTCAGTTTATTGGCATCTAAAGCTACCCTTAACAGTTTTCACAACGATACATCAAACGGTTTCTACGCTCTCTATCTTTGTAGAGGTGATGTTTCAATGGACACATGTCAAGCATGTGTCCGTGATGCCACTCAGAGAATTAGAAAGGAGTGTCCGACGAATAAAACTGCTATTGTGTGGTATGATCAGTGTCTGCTGAGATATTCTGACAGTAACTTCTTCGGTGTACCTTCTACGGAACCGATGTTATTGTGGTGGAATTCCGGGAATTCAACTTCTGCTGCCGAGGAAAGTAACATCGACGCACTCTCTCTTCTATATCCATTGATTAATAAGGCCACGAGTACGGAAACATTGTTCAGTGCTGATCAAATTCCAGTGAACAATGGGGCTGAGCACAGATTTGGGCTTGAGCAGTGTACTAGAGATATAACACCGGATAATTGCAGAACATGTTTGAACCAATTCGTTGAAAGCTACCAGAGGTGTGATCAGTGCATAAGAAGAAAAGGATGGCGCTTTTTGGGTCCTAGTTGCTTTATGAGGTATGAGTCCTATATTTTCTATCAGCAGCAATCACCTCCAGGTCCAACCCCTGTTCAGTCGCCACCAACGGTACCAGATATTAAAGGAGGAAATAATACAGCAAAGGCTGTAGTGATTGCAGTAGCATCAGTTGCAGGAGTTGCAGCTCTATTGGGATTTTGGTACTGTTGTTTCTTTTCCAGGAGAAGAAAAAAAGGTGGAGAGAAAAGCCAAGAAATTCTCTTGAGCGATTTGGAAGGTTCAGCTTCATCCACAATGGATTTAATGGAAAGAAGATTTCAGCATATAGGTGATCAAGACAGTGGAGAGATGCATTATTTTGATTTGAATGCCATAAAGATTGCAACAGATGACTTCTCCAAATCAAACAAGCTTGGTGAAGGAGGATTTGGCCCGGTGTATAAGGGAAAATTGATTGATGGAAGGGAAATAGCAGTGAAAAGGCTTTCCATGAGATCCAGCCAAGGCCTAGAAGAGTTCAAAAATGAGGTACTCCTGATTGTGAAACTTCAGCACCGGAACCTAGTAAGACTTTTAGGATGCTGTTTGGAGGAAAATGAGAAGCTTCTTGTGTATGAATACATGGCCAACACTAGTCTTGATGCATTCCTGTTTGATCCAAAGAAATCTCAGGGCTTGGATTGGGAAAAGAGAGCTAACATCATCAATGGAACAGCGAAGGGCATTTTATATCTGCACGAGGATTCGCGGCTGAAAATCATTCACAGGGACTTAAAAGCAAGCAACATTTTGTTGGATGATGATATGAACCCTAAGATTTCAGATTTTGGCACTGCCAGAATATTTGGTGGCAATCAAATCGAAGCCAACACAGCAAGAGTTGTTGGTACATATGGATACATGGCACCGGAATATGCAGTAGAGGGATTATTTTCTGTGAAGTCAGATGTCTACAGCTTTGGAATTCTAATACTGGAAATAATCAGTGGAAAGAAGAACAGCAGCTTCAACCAGCCAGACCGCCCTTTTAGCTTAATGTTACATGCATGGGAGCTTTGGAATGAAGGAAAAGGGCATGAGCTAATAGATCAAAACATTGTTGATCCCTGCCCAGTAGCTGAAGCTGTAAGATGGATCCATATTGCATTGCTATGCATTCAGGAAGATCCTAATAGTAGGCCAAGCATGTCAACAGTTGTCCTCATGCTTGGGAGCAAATCAATGGATCTTCCTCAACCATTAACATCTCCATTCTCTGTAGCAAAATACATCGTTTCTGAAGGTTCCACGACAAGTACTGGAGCAGGGACAGGACTTTTTATGTCAGATAACCCTTCATCAACGACCTCTAGTTCTTGA 2052 0.4235 MIMLKIHKNAWHPWRCSLIVSIIILQLHQCIHSEKPLFIYPSCSGSADDPMTSTLGANLDALLSLLASKATLNSFHNDTSNGFYALYLCRGDVSMDTCQACVRDATQRIRKECPTNKTAIVWYDQCLLRYSDSNFFGVPSTEPMLLWWNSGNSTSAAEESNIDALSLLYPLINKATSTETLFSADQIPVNNGAEHRFGLEQCTRDITPDNCRTCLNQFVESYQRCDQCIRRKGWRFLGPSCFMRYESYIFYQQQSPPGPTPVQSPPTVPDIKGGNNTAKAVVIAVASVAGVAALLGFWYCCFFSRRRKKGGEKSQEILLSDLEGSASSTMDLMERRFQHIGDQDSGEMHYFDLNAIKIATDDFSKSNKLGEGGFGPVYKGKLIDGREIAVKRLSMRSSQGLEEFKNEVLLIVKLQHRNLVRLLGCCLEENEKLLVYEYMANTSLDAFLFDPKKSQGLDWEKRANIINGTAKGILYLHEDSRLKIIHRDLKASNILLDDDMNPKISDFGTARIFGGNQIEANTARVVGTYGYMAPEYAVEGLFSVKSDVYSFGILILEIISGKKNSSFNQPDRPFSLMLHAWELWNEGKGHELIDQNIVDPCPVAEAVRWIHIALLCIQEDPNSRPSMSTVVLMLGSKSMDLPQPLTSPFSVAKYIVSEGSTTSTGAGTGLFMSDNPSSTTSSS* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00865 683 Gene3D Transferase(Phosphotransferase) domain 1 439 643 - -
Pte19g00865 683 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 58 672 - -
Pte19g00865 683 Gene3D - 23 135 IPR038408 -
Pte19g00865 683 Gene3D - 143 250 IPR038408 -
Pte19g00865 683 SMART serkin_6 363 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00865 683 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 328 438 - -
Pte19g00865 683 ProSiteProfiles Gnk2-homologous domain profile. 37 135 IPR002902 -
Pte19g00865 683 Gene3D Phosphorylase Kinase; domain 1 337 438 - -
Pte19g00865 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Pte19g00865 683 ProSiteProfiles Protein kinase domain profile. 363 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00865 683 Pfam Protein tyrosine and serine/threonine kinase 365 632 IPR001245 GO:0004672|GO:0006468
Pte19g00865 683 Pfam Salt stress response/antifungal 50 132 IPR002902 -
Pte19g00865 683 Pfam Salt stress response/antifungal 176 248 IPR002902 -
Pte19g00865 683 SUPERFAMILY Protein kinase-like (PK-like) 345 649 IPR011009 -
Pte19g00865 683 FunFam Uncharacterized protein 439 640 - -
Pte19g00865 683 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Pte19g00865 683 CDD STKc_IRAK 369 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00865 Pte-Chr19 7162084 7165950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00865 19 649 Receptor kinase-like Gene Family AT4G05200 43.431 1.71e-170 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte19g00865 PK_Tyr_Ser-Thr 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00865 - - hbr:110661922 757.673