Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00842 ATGGATGCTATGAAATTTGTGCCAAATAACAGTTTTGACAGGACAATTATCTTTGTCAAACAAGGTGTTTATCAAGAAAATGTGGAAATCCCAACTTACAAGACAAACATTGTGATGCTTGGAGATGGAAGTGATGTCACTGTTATCAAAGGCAACAGACGTGTAGCTGGAGATAGAAAAATTTCTACACCAACGCCCATTTCCGAACCCGCTATTCCTGGCGAACGCAGATAG 234 0.4017 MDAMKFVPNNSFDRTIIFVKQGVYQENVEIPTYKTNIVMLGDGSDVTVIKGNRRVAGDRKISTPTPISEPAIPGERR* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00842 77 Pfam Pectinesterase 2 58 IPR000070 GO:0030599|GO:0042545
Pte19g00842 77 ProSitePatterns Pectinesterase signature 1. 11 30 IPR018040 -
Pte19g00842 77 PANTHER PECTINESTERASE 2 59 - -
Pte19g00842 77 SUPERFAMILY Pectin lyase-like 2 58 IPR011050 -
Pte19g00842 77 MobiDBLite consensus disorder prediction 57 77 - -
Pte19g00842 77 Gene3D - 1 69 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00842 Pte-Chr19 6996442 6997580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00842 2 56 Carbohydrate Esterase AT2G26440 63.636 9.41e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00842 - - qsa:O6P43_021970 93.9745