Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00807 ATGGGAGTCATAAAGACAATCATACATGAAGGGGAGGGTTGGGAATCTCCTAGGGAACCTTATGAAGTGAAGGCTTGGATTTCTGCAAAGACAGGTTCTGGAAAATTGATTATGTCACATACTAAAGGAGAACCATATTTCTTTACCTTTGGGAAATCAGAGGTACCTAAAGGTCTTGAAATGGGAATTGGGACAATGTCTCGGCATGAAAAAGCCATAATATATGTCACCAGCCAGTACTTAAGTGTGTCTCCTCTCATGTCCCTCGAAGAAGGATATGAAGAAATTCAGTTCGAAGTGGAACTTGTGCATTTCATTCAGGTAAGGGACATGCTTGGAGATGGCCGACTGATCAAACGCAGAATTCGTGATGGGAAAGGTGAGTTTCCAATGGATTGCCCTCTGCATGACAGTCTACTGCATGTTCATTACAAGGGAATGCTGCTCAATGAAGAAAAGACAGTCTTCTATGACACAAGAGTCAATAATGATGGTCAGCCGTTGGAGTTCAGTTCAGGAGAAGGATGTGTACCTGAGGGATTTGAAATGAGTGTTCGTCTGATGCTCCCTGGAGAGATAGCCCTAGTGACCTGCCCTCCTGATTATGCTTATGACAAATTCCCTAGACCAGAAAATGTTCCTGAAGGTGCTCATATTCAATGGGAAATTGAGCTTCTTGGTTTCGAAATGCCAAAGGATTGGACTGGGCTCGACTTCAAAAGTATAATGAATGAAGCAGAAAAGATCAGAATCACGGGAAACAGGCTTTTCAAAGAAGGGAAATTTGAACTCGCTAAGGCCAAATATGAGAAGGTACTTCGGGAATTTAATCATGTTAATCCCCAGGATGATGAGGAAGGAAAGGAGTTCTCAGATATCCGTAATTTGTTATATTTGAATGTTGCTGCGTGCTATCTTAAGTTGGGAGAGTGCAGAAAGTCTATCGAAACATGCAATAAGGTTTTGGAAGCAAACCCTGCACATGTAAAAGGTCTTTATCGCCGTGGAATGGCCTACATGACGGCTGGAGATTTTCAGGAAGCACGAGATGATTTCAAAATGATGATAAAAGTTGACAAGTCAACTGAACCTGATGCAACAGCAGCTCTGCAAAAATTAAAGCAGAAGGAGCAGGAAGTTGAAAGGAAGGCTAGAAAACAATTTAAAGGACTCTTTGACAAGAAACCTGGAGAAATTGCAGAAGCCAAAGTTGAAGATACTGGAGGGGATGAACGCACAGGTTTGTTGAAGGAAAATAATGAAGATGACCCAGACGAGACAAGTTCAGAGAGATCTCATGAAGCTGCTCCTGATGATCATCGAAAGAGTTGGTTCTCTCTATTTTGGCCTTCTGGTAGAAGATTATTTTCATCTCTTGGGTTGAATAGATGTTCCATATTATAG 1404 0.4174 MGVIKTIIHEGEGWESPREPYEVKAWISAKTGSGKLIMSHTKGEPYFFTFGKSEVPKGLEMGIGTMSRHEKAIIYVTSQYLSVSPLMSLEEGYEEIQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLHVHYKGMLLNEEKTVFYDTRVNNDGQPLEFSSGEGCVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFPRPENVPEGAHIQWEIELLGFEMPKDWTGLDFKSIMNEAEKIRITGNRLFKEGKFELAKAKYEKVLREFNHVNPQDDEEGKEFSDIRNLLYLNVAACYLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYMTAGDFQEARDDFKMMIKVDKSTEPDATAALQKLKQKEQEVERKARKQFKGLFDKKPGEIAEAKVEDTGGDERTGLLKENNEDDPDETSSERSHEAAPDDHRKSWFSLFWPSGRRLFSSLGLNRCSIL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00807 467 Gene3D - 107 228 IPR046357 GO:0003755
Pte19g00807 467 PANTHER PEPTIDYLPROLYL ISOMERASE 107 450 - -
Pte19g00807 467 MobiDBLite consensus disorder prediction 399 440 - -
Pte19g00807 467 Pfam Tetratricopeptide repeat 330 354 IPR019734 GO:0005515
Pte19g00807 467 Pfam Tetratricopeptide repeat 298 328 IPR019734 GO:0005515
Pte19g00807 467 SUPERFAMILY FKBP-like 2 105 - -
Pte19g00807 467 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 137 229 IPR001179 GO:0003755
Pte19g00807 467 Coils Coil 366 386 - -
Pte19g00807 467 SMART tpr_5 329 362 IPR019734 GO:0005515
Pte19g00807 467 SMART tpr_5 246 279 IPR019734 GO:0005515
Pte19g00807 467 SMART tpr_5 295 328 IPR019734 GO:0005515
Pte19g00807 467 FunFam Peptidylprolyl isomerase 107 231 - -
Pte19g00807 467 FunFam Peptidylprolyl isomerase 1 106 - -
Pte19g00807 467 SUPERFAMILY TPR-like 243 384 IPR011990 GO:0005515
Pte19g00807 467 ProSiteProfiles TPR repeat profile. 329 362 IPR019734 GO:0005515
Pte19g00807 467 Gene3D - 1 106 IPR046357 GO:0003755
Pte19g00807 467 FunFam Peptidylprolyl isomerase 234 390 - -
Pte19g00807 467 ProSiteProfiles TPR repeat profile. 295 328 IPR019734 GO:0005515
Pte19g00807 467 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 20 103 IPR001179 GO:0003755
Pte19g00807 467 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 138 226 IPR001179 GO:0003755
Pte19g00807 467 Gene3D Tetratricopeptide repeat domain 240 394 IPR011990 GO:0005515
Pte19g00807 467 SUPERFAMILY FKBP-like 93 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00807 Pte-Chr19 6539410 6546746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00807 2 394 Calmodulin-binding Proteins AT5G48570 29.280 6.11e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00807 - - qsa:O6P43_016692 806.594