Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00792 ATGCTTGAACCGGATATGATGCACATAGTTTTTGTCCACTACTTGGAAGTTAAGGGTAACAGGACTAATGTGGGAGCAAACAGGGACATTGATGAGGCTGCTTCTGTCTCCAGAAGTGGAAGTTCTATGGTCTCCAGTGCAGTGCCTTCAGGAAGTACGGACTCCATGAGCCCAACTAGTACATTAACGTCATTATGTGAAGATGCTGACTCTGGAGACATTCACCAATTAGGTTCCACTGTTAACTCAATCCACGTGTCACCAGCTCTTGGGAATGGTCTCATGAACAAGCTAGATCCTGGGCTGCTAAACCCATTCCTTGTACACCCCTCTCCAGATCACTTCGCCCAAGTTCATGGAAATAAATCCACAGCAAGTCATGATTCTACTGCCATTGCAAGGCAAATTCCTAATGGCTTGACACCCTGGGATAAGGTCCTTCAACAACGTCCAGCTGAATTCCTTAATGATCCTTCTCTTCTCCCTTCTTCTAGCCAGCCCATATCAATGGGGAACATCCTCGCAGAAGGGAATTATGTTATTAGTGACCTTTTAATGGGTAAGAATGCCCTTGCTGAGGAAGGTACAAGCTCACTGCCTATCCAATCGAGTTGGCAGACCCCTGAAGAAACACAACGGAATGTTCCCAAATGGCCCATCTCCCAATTATTGAGTTCAGAACTCGGACCTGATTTTGATATGGATTTATTTGAGCAAAGGTTTATGGATGGGAGTTTGGAACTTTCTCCCCAGCTTTTTAATGTTCCTGGGCATCCAAATGATCCTCCTGGGGAAGAGAACTCTGCAGTGTTTCTGGAAAACACACAATTGAAATACTCTGAGAATCTAGTCCCTGTTGAAGAAAATATTGGTCAAATTTTAAATGTCAAGCGCTCTTTATTAGATGCGGAAGAGAGTTTGAAGAAAGTCGATAGCTTCTCTAGGTGGATCTCGAAAGAACTTGGGGATGTAGATGATCTGCAGATGCAGTCCTCATCTGGTATTTCATGGACAGTTGACTGTGGGAATGTAATTGATGATTCTTCCTTAAGCCCCTCTCTCTCTCAGGACCAACTTTTCAGTATAACTGATTTTTGGCCAAAATGGACTTTAGCAGATTCTGAGACTGAGGTGATTATTACAGGAAAGTTTTTGAAAGGCCGGCAGGACATAGCAAATTGCAAATGGTCTTTTATGTTTGGGGAATTGGAGGTTCCTGCTGAACTTTTAGCTGATGGGGTTCTTAGCTGTCGTGCTCCAGCTCATAAGGAGGGCAGAGTCCCCTTCTACATGACGTGTTCCAATAGACTAGCTTGTAGTGAAGTTAGAGAATTTGATTATCAAGAAGGCTCTAGCAATAAAATAGAAATTGAAGATGTTTATGGCAATTCGGCAAGAGATATGATGCTTCATTTTCGCCTTGAGAGGCTACTGTTACAGAAATCTGGGTGGCGTTCGAATTATGTTTATGAAGATGATGCTCGTAAAAGGAGCATAATTGCCAAGTTGATATCACTAAAAGAGGAAGAGGAATTTTCTCAAAATGAAGACTCGGCGCCAGAGATGGATTTGTTTCATTGGAGAGTGAAGGAGCTTATCCTGCAAAAGCAACTTAAAGAGAAACTTTATGCCTGGCTTATTAACAGAGTCAGTGAAGATGGAAAAGGGCCCTGTGTATTGGATAGAGATGGACAAGGTGCGCTACACTTGGTAGCTGCTCTTGGATATGATTGGGCCATTGTACCAATTATAAGAGCTGGAGTTAGTATCAATTTCCGAGATGTGAATGGGTGGACAGCTCTGCACTGGGCTGCTTCGAGTGGCAGAGAGAAGACAGTGGCTGTTCTTGTCTCTCTTGGTGCAGCACCTGGACTATTGACTGACCCATCACCTGAACATAAACGGGGAAGGACACCAGCTGACCTTGCCTCTGACAACGGGCATAAAGGCATGTCGGGCCTCCTTGCAGAGTTCTCGCTAGTCAGCCACCTCTCATCCCTTGCAGTCGATGATTGTAGGGAAGATGCTGGCCGAGAAGCTGCTGGATTGAAGGCTGTGCAAACTATTTCTGAGAGGACAGCGACACCTGGGATATATGGTGATGTAGCTGAGGAATTGTCCCTGAAGGATTCTCTCACTGCTGTGTTGAATGCCACGCAGGCTGCTGACAGGATACATCAAGTTTACAGAATGCAGTCATTCCAGAGGAAGCAATTAACGGAGTTTGAAAATGATGAATTAGGACTCTTAGACCAGTATGCCGTTTCCCTTCTAGCTTCCAGAGAAGGTAGATCTGGACAAGGTGATGGGTTAGCTCAGGCTGCCGCTACACACATACAAAAGAAGTTTCGTGGTTGGAAGAAGAGGAAAGAATTTCTGATAATTCGCCAGAGAATTGTTAAAATCCAGGCTCATGTGAGAGGCCATCAGGTAAGGAAGAAGTACAAATCAGTCATTTGGTCGGTAGGAATCCTGGAGAAGGTGATCCTGAGATGGAGACGCAGGGGGAGTGGTTTGCGTGGGTTTCGATCAGAGGCTATCAACAAGGATCAGAACCAACCTCCACCATTGCCTTCACGAGAGGATGATTATGATTTTCTGAAGGAAGGAAGGAAGCAAACTGAGGAAAGGTTGCAAAAGGCACTTTCAAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGAGCTCAATACCGTAGGCTTCTGACTGTTGTTGAGGGTTTTCGTGAGAACAAGGTATGTTCATTTGTTTTGGTATTTTACATATTCGCGTATGCAAACAATGGACCAAGCACTTGA 2799 0.4469 MLEPDMMHIVFVHYLEVKGNRTNVGANRDIDEAASVSRSGSSMVSSAVPSGSTDSMSPTSTLTSLCEDADSGDIHQLGSTVNSIHVSPALGNGLMNKLDPGLLNPFLVHPSPDHFAQVHGNKSTASHDSTAIARQIPNGLTPWDKVLQQRPAEFLNDPSLLPSSSQPISMGNILAEGNYVISDLLMGKNALAEEGTSSLPIQSSWQTPEETQRNVPKWPISQLLSSELGPDFDMDLFEQRFMDGSLELSPQLFNVPGHPNDPPGEENSAVFLENTQLKYSENLVPVEENIGQILNVKRSLLDAEESLKKVDSFSRWISKELGDVDDLQMQSSSGISWTVDCGNVIDDSSLSPSLSQDQLFSITDFWPKWTLADSETEVIITGKFLKGRQDIANCKWSFMFGELEVPAELLADGVLSCRAPAHKEGRVPFYMTCSNRLACSEVREFDYQEGSSNKIEIEDVYGNSARDMMLHFRLERLLLQKSGWRSNYVYEDDARKRSIIAKLISLKEEEEFSQNEDSAPEMDLFHWRVKELILQKQLKEKLYAWLINRVSEDGKGPCVLDRDGQGALHLVAALGYDWAIVPIIRAGVSINFRDVNGWTALHWAASSGREKTVAVLVSLGAAPGLLTDPSPEHKRGRTPADLASDNGHKGMSGLLAEFSLVSHLSSLAVDDCREDAGREAAGLKAVQTISERTATPGIYGDVAEELSLKDSLTAVLNATQAADRIHQVYRMQSFQRKQLTEFENDELGLLDQYAVSLLASREGRSGQGDGLAQAAATHIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKKYKSVIWSVGILEKVILRWRRRGSGLRGFRSEAINKDQNQPPPLPSREDDYDFLKEGRKQTEERLQKALSRVKSMVQYPEARAQYRRLLTVVEGFRENKVCSFVLVFYIFAYANNGPST* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00792 932 ProSiteProfiles IQ motif profile. 772 801 IPR000048 GO:0005515
Pte19g00792 932 Gene3D - 528 678 IPR036770 -
Pte19g00792 932 Pfam IPT/TIG domain 361 438 IPR002909 -
Pte19g00792 932 FunFam Calmodulin-binding transcription activator 2 771 819 - -
Pte19g00792 932 FunFam Calmodulin-binding transcription activator 2 355 451 - -
Pte19g00792 932 ProSiteProfiles CG-1 DNA-binding domain profile. 1 23 IPR005559 GO:0003677
Pte19g00792 932 Coils Coil 864 884 - -
Pte19g00792 932 ProSiteProfiles IQ motif profile. 795 819 IPR000048 GO:0005515
Pte19g00792 932 SMART ANK_2a 596 625 IPR002110 GO:0005515
Pte19g00792 932 SMART ANK_2a 635 664 IPR002110 GO:0005515
Pte19g00792 932 SMART ANK_2a 563 592 IPR002110 GO:0005515
Pte19g00792 932 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Pte19g00792 932 SMART iq_5 771 793 IPR000048 GO:0005515
Pte19g00792 932 SMART iq_5 794 816 IPR000048 GO:0005515
Pte19g00792 932 SUPERFAMILY E set domains 362 447 IPR014756 -
Pte19g00792 932 Pfam IQ calmodulin-binding motif 774 792 IPR000048 GO:0005515
Pte19g00792 932 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Pte19g00792 932 SUPERFAMILY Ankyrin repeat 547 657 IPR036770 -
Pte19g00792 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 774 822 IPR027417 -
Pte19g00792 932 Gene3D - 772 818 - -
Pte19g00792 932 MobiDBLite consensus disorder prediction 34 62 - -
Pte19g00792 932 Pfam Ankyrin repeats (3 copies) 568 655 IPR002110 GO:0005515
Pte19g00792 932 Gene3D Immunoglobulins 355 452 IPR013783 -
Pte19g00792 932 ProSiteProfiles Ankyrin repeat region circular profile. 596 621 - -
Pte19g00792 932 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00792 Pte-Chr19 6399470 6408033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00792 1 915 CAMTA Transcription Factor Family AT5G64220 51.299 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00792 K21596 - qsa:O6P43_012338 1065.06