Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00790 ATGGATAATCTGTGTTGCTTCAGCTCTGTCTACTCTCAGGTTGTTGGAGGGCGTTCTTCTTCTAGCTCTGGCAAAGGTAGGAGCCATGAAAGCCCTACCAAGTATGGATATAGCCTAGTTAAAGGCAAAGCCAACCATCCGATGGAGGATTACCATGTAGCAAAGTTTGTTCAGCATCGTGGACATGAGCTTGGACTCTTTGCCATATATGATGGTCACTTAGGAGACAGTGTACCATCCTATCTACAGCAACATCTTTTCACTAATATCCTAAAGGATGATGAGTTCTGGACAGATCCAATTAACGCGATTCCTAAAGCATATGAGTTAACAGACCAGGCTATTCTTTCTCACAGCCCTGACTTGGGACGTGGGGGATCAACTGCAGTAACTGCAATTTTAGTAAACCACCGGAAACTGTGGATAGCCAATGTTGGCGATTCACGAGCAGTTCTTTCAAAGAGAGGACAGGCCATACAGATGACTACTGATCATGAGCCTAATAATGAGAGAGGGAGCATTGAGGATAGGGGAGGCTTTGTATCAAATATGCCAGGAGATGTGGCGAGGGTGAATGGCCAGCTTGCAGTTTCACGTGCATTCGGCGACAAGAACCTCAAATCTCATCTTCGATCTGATCCTGACGTACAAAATGCTGACATTGATCATGATACTGACTTTCTGATACTTGCTAGTGATGGCCTTTGGAAGGTGATGTCTAACCAAGAAGCAGTTGATTTTGCTAAGAAGATAAAAGATCCCCAAAGGGCTGCAAAACAGTTAGTTGCAGAGGCATTAAACAGAGACAGTAAAGATGATATTTCCTGCATAGTAGTTCGTTTCAAGGCTTGA 852 0.4413 MDNLCCFSSVYSQVVGGRSSSSSGKGRSHESPTKYGYSLVKGKANHPMEDYHVAKFVQHRGHELGLFAIYDGHLGDSVPSYLQQHLFTNILKDDEFWTDPINAIPKAYELTDQAILSHSPDLGRGGSTAVTAILVNHRKLWIANVGDSRAVLSKRGQAIQMTTDHEPNNERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQNADIDHDTDFLILASDGLWKVMSNQEAVDFAKKIKDPQRAAKQLVAEALNRDSKDDISCIVVRFKA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00790 283 SMART PP2C_4 30 279 IPR001932 -
Pte19g00790 283 MobiDBLite consensus disorder prediction 15 29 - -
Pte19g00790 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Pte19g00790 283 MobiDBLite consensus disorder prediction 15 34 - -
Pte19g00790 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Pte19g00790 283 Gene3D - 29 283 IPR036457 -
Pte19g00790 283 FunFam Probable protein phosphatase 2C 39 24 282 - -
Pte19g00790 283 CDD PP2Cc 34 281 IPR001932 -
Pte19g00790 283 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Pte19g00790 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Pte19g00790 283 SUPERFAMILY PP2C-like 30 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00790 Pte-Chr19 6386649 6391521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00790 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.181 2.91e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00790 K17506 - pvy:116142160 478.018