Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00774 ATGGCTGCAGTGGTTGGTATCTTTGTGGGTCAGGCATGGAGTGGAATCCCGTGGTTTGAAGCTGGAGCTGACCCTGGCGCCGTAGCACCTTTCTCCTTTGGTTCACTTCTGGGAACTCAATTGCTTCTCATGGGATGGGTAGAAAGCAAAAGATGGGTGGACTTCTTTAACCCTGAATCGCAGTCTGTGGAGTGGGCCACACCGTGGTCAAAGACTGCAGACAACTTTGCTAATTCCACCGGAGACCAAGGGTACCCTGGTGGGAAATTCTTTGACCCCTTGGGCTTGGCTGGAACTCTCAAAGATGGAGTTTATATTCCAGATAGAGAGAAACTGGAGAGGTTGAAAGTAGCTGAGATCAAACATGCTAGACTTGCCATGTTAGCTATGTTGATTTTCTACTTTGAGGCTGGACAAGGGAAGACACCTCTTGGTGCTCTTGGCTTGTAA 450 0.4889 MAAVVGIFVGQAWSGIPWFEAGADPGAVAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKTADNFANSTGDQGYPGGKFFDPLGLAGTLKDGVYIPDREKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00774 149 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 147 IPR001344 GO:0009765|GO:0016020
Pte19g00774 149 Gene3D Chlorophyll a/b binding protein domain 1 148 - -
Pte19g00774 149 SUPERFAMILY Chlorophyll a-b binding protein 1 149 - -
Pte19g00774 149 Pfam Chlorophyll A-B binding protein 1 137 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00774 Pte-Chr19 6251565 6252014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00774 1 150 Chloroplast and Mitochondria Gene Families AT1G15820 88.000 2.25e-93 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00774 K08917 - pop:7473011 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00774 19 6251565 6252014 Pte19g00774 19 6251565 6252014 RCT