Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00772 ATGAGTAGGAGAATAAGCGACGACCTTGTAGGAATGGCTATGGAGGAGACAAAGATGGAAGCCTCTTCACGTCCTCATGCAGACACGTTGAAGTATATTCATAAAGTGGGGACTCCTCCAAAGCGGAAACTTCTTCATGAAATCAAAGATGTAGTAAAGGAAACTTTCTTTGCAGACGACCCATTGGGCAATTTCAAAGGACAAAGCAGGTCAAGGAAGTTTGTTCTTGGACTTAAAGCTGTTTTCCCGATTCTTGAATGGGGGAAAGGTTATGATTTACACAAATTCAAAGGTGACCTGATTGCTGGACTCACCATTGCAAGTTTGTGCATACCTCAGGATATTGCATATGCAAAGCTTGCAAACCTCCAAGCCGAGTATGGACTATACACCAGCTTTGTTGCTCCTCTTGTTTATGCCTTCATGGGAAGCTCAAGAGATATAGCCATAGGACCAGTTGCAGTGGTGTCCTTATTGCTTGGGAGTATGCTGTCAAATGTGATTGATGACTATAAAAACCCAGACTATCTGCGTCTTGCATTTACTGCAACCTTTTTTGCTGGAATCACTCAAATGGCACTGGGCGTTCTCAGACTTGGTTTCTTAATTGACTTCCTATCTCATGCTGCAATTGTTGGTTTCATGGCTGGAGCGGCCATTACCATTGGCCTGCAGCAGCTGAAAGGCCTGCTTGGAATTCAAAAGTTCACCAAAAATACTGATATTGTCTCTGTCCTGAAATCAGTAATAAGTTCAGCACATCATGGGTGGAACTGGCAGACTATTGTGATAGGAATATCATTCTTGGTCTTCCTTTTGATTGCAAAGCAATTGGGCAAAAAGAACAGAAAGTTGTTCTGGATTTCTGCAATTGCCCCTTTGTTCTCCGTTGTTCTGTCAACATTCTTCGTGTACATTACCCATGCTGAAAATAAAGGTGTTGCAATTGTCAGACACATAGATAAAGGTGTAAATCCATCATCTGTTAGCAAAATCTTTTTCAGCGGAGACTATCTTGTTGATGGTATTCGGATTGGTGCAATATCTGCTCTTATAGCCCTAACGGAAGCCACAGCGATTGGTAGAACATTTGCATCCATGAAAGATTATCACCTTGATGGGAACAAAGAAATGGTTGCTTTGGGGACAATGAATCTTATTGGTTCATTCACATCTTGTTATGTGGCCACAGGATCATTTTCTCGGTCTGCAGTGAACTACATGGCTGGCTGCAAGACGGCAGTGTCGAACATTGTTATGTCAATTGTTGTACTGCTGACTCTGCTATTCATTACCCCTTTATTCAAGTACACCCCAAATGCTATACTTGCTTCCATTATCATAGCAGCTGTTGCGGGTCTGGTTGACATTGATGCAGTAATTTTGTTGTGGAAAATCGACAAGTTTGACTTCGTTGCTTGTATGGGAGCATTCTTGGGTGTCATATTCAAAAGTGTTGAGATTGGCCTTCTCATTGCTGTTGTTCTATCACTTGCTAAGATTCTTCTACAAGTGACAAGGCCACGGACTGCTGTACTTGGAAAGCTCCCAGGCACTAACATTTACAGGAATATTCAGCAATATCCGAAAGCTACACAAGTTCCGGGCATTTTGATTGTCAGAGTTGATTCTGCCATATACTTTTCCAATTCGAACTACATCAAGGAGAGAATTTTGAGATGGCTGGCTGATGAAGATGCTGGAAGGAGAGAAGGAAATTTATCAAGAATTCAGTATCTCATCGTTGAAATGTCACCTGTTACTGACATTGACACTAGTGGAATCCATGCTTTTGAGGAATTATGCAAGAGTCTTCAGAAGAGAGAGATTCAGCTTATCTTGGCAAACCCGGGAGCAGTGGTTATGGAGAAGCTCCATGCATCTCACTTGACAAACTTAATTGGGGAGGATAAGATTTTTCTCTCAGTTGGTGATGCAGTTGAAACAGTTGGTCCAAAAATCGAGCATCCTGATGTTTAG 1980 0.4192 MSRRISDDLVGMAMEETKMEASSRPHADTLKYIHKVGTPPKRKLLHEIKDVVKETFFADDPLGNFKGQSRSRKFVLGLKAVFPILEWGKGYDLHKFKGDLIAGLTIASLCIPQDIAYAKLANLQAEYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSMLSNVIDDYKNPDYLRLAFTATFFAGITQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIGLQQLKGLLGIQKFTKNTDIVSVLKSVISSAHHGWNWQTIVIGISFLVFLLIAKQLGKKNRKLFWISAIAPLFSVVLSTFFVYITHAENKGVAIVRHIDKGVNPSSVSKIFFSGDYLVDGIRIGAISALIALTEATAIGRTFASMKDYHLDGNKEMVALGTMNLIGSFTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVVLLTLLFITPLFKYTPNAILASIIIAAVAGLVDIDAVILLWKIDKFDFVACMGAFLGVIFKSVEIGLLIAVVLSLAKILLQVTRPRTAVLGKLPGTNIYRNIQQYPKATQVPGILIVRVDSAIYFSNSNYIKERILRWLADEDAGRREGNLSRIQYLIVEMSPVTDIDTSGIHAFEELCKSLQKREIQLILANPGAVVMEKLHASHLTNLIGEDKIFLSVGDAVETVGPKIEHPDV* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00772 659 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Pte19g00772 659 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Pte19g00772 659 Gene3D STAS domain 507 651 IPR036513 -
Pte19g00772 659 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Pte19g00772 659 Pfam STAS domain 528 646 IPR002645 -
Pte19g00772 659 FunFam Sulfate transporter 31 507 653 - -
Pte19g00772 659 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Pte19g00772 659 PANTHER SULFATE TRANSPORTER 46 649 IPR001902 GO:0016020|GO:0055085
Pte19g00772 659 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Pte19g00772 659 NCBIfam sulfate permease 83 646 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00772 Pte-Chr19 6237759 6241834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00772 15 655 Inorganic Solute Cotransporters AT1G22150 71.495 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00772 K17470 - qsa:O6P43_012314 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00772 19 6237759 6241834 Pte19g00772 19 6237759 6241834 RCT