Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00762 ATGGCAGACGATAACAATGTCAACCTACCACCTGGTTTTCGATTTTATCCAACTGATGAAGAGCTTGTAGTTCATTTCCTTCATAGAAAGGCAGCTGTTCTACCTTGCCACCCTGATGTCATCCCTGATCTTGAACTGTATCCTTATGATCCTTGGGAACTTGATGGGAAAGCTTTAGCTGAGGGAAACCAATGGTACTTCTATAGCAGGAGGACGCAGAATAGGCTAACTGGAAATGGATATTGGAAACCAATGGGGATTGAAGAACCGGTGATTGCTAGCTCAAGCAATAAGAAAGTGGGGATGAAGAAATATTTCATGTTCTATGTTGGAGAAGCTCCTGAAGACATCAAAACTAATTGGATTATGCATGAGTATCGGCTCTCAGATGCTGCTGCATCCTCTAGCAAGAGGAGAGGATCTCATTCCAAAACAGATCATAGTAGATGGGTTGTATGTCGAGTTTATGAGCGTGATGACGATGACGATGATGATGGAACAGAACTGTCATGTTTGGATGAAGTTTTCTTATCATTGGACGATCTCGAAGAAATAAGTCTACCAAATTAG 570 0.4175 MADDNNVNLPPGFRFYPTDEELVVHFLHRKAAVLPCHPDVIPDLELYPYDPWELDGKALAEGNQWYFYSRRTQNRLTGNGYWKPMGIEEPVIASSSNKKVGMKKYFMFYVGEAPEDIKTNWIMHEYRLSDAAASSSKRRGSHSKTDHSRWVVCRVYERDDDDDDDGTELSCLDEVFLSLDDLEEISLPN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00762 189 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Pte19g00762 189 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Pte19g00762 189 Pfam No apical meristem (NAM) protein 10 128 IPR003441 GO:0003677|GO:0006355
Pte19g00762 189 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Pte19g00762 189 PANTHER NAC TRANSCRIPTION FACTOR 56 9 163 - -
Pte19g00762 189 FunFam NAC domain-containing protein 104 18 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00762 Pte-Chr19 6108630 6109480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00762 1 177 NAC Transcription Factor Family AT1G69490 40.541 6.59e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte19g00762 NAM 3.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00762 - - tcc:18608343 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00762 19 6108630 6109480 Pte19g00762 19 6108630 6109480 RCT