Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00734 ATGGCTGACAATCATCCTATTGTGATTGACAATGGAACTGGGTTTATCAAGGCTGGATTTGCAGATGATGATTCCCCAAAGGCTGTGTTTCCTTGTGTCGTGGGTAGACCTCGTAAACGTGGTGCAACACAGAAGGAAGCTTATTTGGGGGATGAGTTCCTCTCAGCAAGAGCTATCCTTAAATTGACATATCCAATTGAGCATGGTATAGTCAGCAATTGGGATGATATGGTAGAGATTTGGGATCATACTTTCTTCCACGTTCTTGACGCTGAACCTGAAGAACACCCAGTTCTCCTAACCGATGCACCACTCAACCCCAAGGTGAACAGAGAGAAGATGGCCCAAATCATGTTCGAGAATTTCAATGTGCCTTCCATGTATGTTGCTACTCAAGCCGTTCTGTCCCTCCTAGCCAGTGGACGTACAACAGGTAGTGAAGCTGGACTTGTGTAG 456 0.4583 MADNHPIVIDNGTGFIKAGFADDDSPKAVFPCVVGRPRKRGATQKEAYLGDEFLSARAILKLTYPIEHGIVSNWDDMVEIWDHTFFHVLDAEPEEHPVLLTDAPLNPKVNREKMAQIMFENFNVPSMYVATQAVLSLLASGRTTGSEAGLV* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00734 151 Pfam Actin 3 145 IPR004000 -
Pte19g00734 151 PRINTS Actin signature 44 55 IPR004000 -
Pte19g00734 151 PRINTS Actin signature 135 151 IPR004000 -
Pte19g00734 151 PRINTS Actin signature 110 123 IPR004000 -
Pte19g00734 151 PRINTS Actin signature 56 78 IPR004000 -
Pte19g00734 151 PRINTS Actin signature 25 34 IPR004000 -
Pte19g00734 151 PANTHER ACTIN 6 145 IPR004000 -
Pte19g00734 151 SUPERFAMILY Actin-like ATPase domain 3 145 IPR043129 -
Pte19g00734 151 Gene3D - 2 148 - -
Pte19g00734 151 CDD NBD_sugar-kinase_HSP70_actin 7 151 - -
Pte19g00734 151 SMART actin_3 4 151 IPR004000 -
Pte19g00734 151 FunFam Muscle actin 7 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00734 Pte-Chr19 5880383 5880989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00734 3 145 Cytoskeleton Gene Families AT5G09810 70.748 2.07e-72 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00734 K10355 - peq:110035365 214.927