Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00733 ATGCTACCTGAATATGAGCGTGTAACAACAGGTATTGTGGTTGATTGTGGTGATGGAGTGAGCCACACTGTTCCAGTCCGTGATGGCTATGCTCTACAAAACGCGATTCAGAAAATGGACATTGGGGGTCGTGATTTGACGGGCTACTTGACGAATATCTTGACAGAGAACGGTTATCTCTTCTCCACCCATTCCGAGCGTGAACTTGTACGTGACATCAAGGAGAAACTCGGTTTTGTTTCCCTGGATTACAAGCAAGAGTTGGAGACTGCCAAGAGCAGCTCTGCTGTTAAAAAGTATTACGAGTTGCCTGATGGGCAGGTCATCGAAATTGGAGCTGAGTTGTTCAGATGCCCAGAAGTGCTGTTCAATCCTTCTTTGATTGGTAGGAATCATGGTGGCATCCATGAAATGACCTACAGCTCTATCATTAAAAGTGATATCAGGGTCCGGAAGGATCTCTTTGGAAATATTGTGCTTAATGGCGGATCAACCATGTTCCCTGGTATGGCTGATAGAATCAGCAAGAAAATTACATCACTTGCTCCCAGCAGCATGAAAGTGGAGGTCGAGGCTCCTCCTGATAGGCAATTCAGAGCTTGGATGGGTGGTTCCATCTTTGCTTCATTTGATCACTTTCAACATTCGTGGATTTCCAACGATGAGTATAAAGAATCAGGCTCTGCAATTGTTCACCGGAAATGTCCTTGA 711 0.4515 MLPEYERVTTGIVVDCGDGVSHTVPVRDGYALQNAIQKMDIGGRDLTGYLTNILTENGYLFSTHSERELVRDIKEKLGFVSLDYKQELETAKSSSAVKKYYELPDGQVIEIGAELFRCPEVLFNPSLIGRNHGGIHEMTYSSIIKSDIRVRKDLFGNIVLNGGSTMFPGMADRISKKITSLAPSSMKVEVEAPPDRQFRAWMGGSIFASFDHFQHSWISNDEYKESGSAIVHRKCP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00733 236 Gene3D Actin; Chain A, domain 4 41 132 - -
Pte19g00733 236 PANTHER ACTIN 8 228 IPR004000 -
Pte19g00733 236 Pfam Actin 9 235 IPR004000 -
Pte19g00733 236 PRINTS Actin signature 1 20 IPR004000 -
Pte19g00733 236 PRINTS Actin signature 97 113 IPR004000 -
Pte19g00733 236 Gene3D - 200 230 - -
Pte19g00733 236 Gene3D - 8 199 - -
Pte19g00733 236 SMART actin_3 1 236 IPR004000 -
Pte19g00733 236 FunFam Actin, alpha skeletal muscle 41 132 - -
Pte19g00733 236 SUPERFAMILY Actin-like ATPase domain 8 235 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00733 Pte-Chr19 5879202 5880050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00733 9 235 Cytoskeleton Gene Families AT5G09810 69.604 2.23e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00733 K10355 - sind:105159391 331.257