Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00732 ATGGCTGATGAAAAGTCACCACCTATTGTTATTGACAATGGAACCGGGGTGATCAGGGCTGGATTTACAGGTGAAGATGCACCAAGAGCTGTGTTCCCCACCATGGTCGGTAGACCTCGTTCTCTTCATGGAATGGTTGGTATGAAACAAAAGGATTTCTATGTAGGAGACGAGGCTCTGTCCAAAAGAGGGGTTCTCACATTGAAATTCCCAATTGAGTATGGCATAATTTACGACTATGACGCCATGGAGAAGATTTGGCATCATACTTTCTACAATGTGCTTGAAATTAACCCTGAGGAGCACCCTGTTCTTCTGACTGAGGCACCAAAATGTCCAAAGGCTCAAAGAGAGAAGATGACTCAAATTATGTTTGAGACGTTCAATGTGCCAAAAATGAATGTCTCGATTCAGTCAGTTCTGTCTCTCTATGCAACAGGTCGTTCAACAGGTTTAGTGGTTGATTCTGGTGAGAGTGAAAAACTCGTTTATGTGGCCCTTGATTATGTGAAAGAATCACAGGCTGCAGAGACAAGGTCTGTAGTTGAGAAGAGCTACAAATTGCCTGATGGGCAAATCATCACAATTGGAGCTGAGAGATTCATTTGCGCAGAAGCTCTCTTTGATCCTTCTCTTGTAGGACTAGAAGCATATGGTATCCATCAGATCATAGAGCAGTCTGTAGAGAAATGTGATTCCAATATCAGGAAGGATCTGTATGGAAATATTGTGCTGAGTGGTAGATCAACCATGTTCCCTGTGCCTGGCTTGGTGGTTCTATCTTAG 786 0.4326 MADEKSPPIVIDNGTGVIRAGFTGEDAPRAVFPTMVGRPRSLHGMVGMKQKDFYVGDEALSKRGVLTLKFPIEYGIIYDYDAMEKIWHHTFYNVLEINPEEHPVLLTEAPKCPKAQREKMTQIMFETFNVPKMNVSIQSVLSLYATGRSTGLVVDSGESEKLVYVALDYVKESQAAETRSVVEKSYKLPDGQIITIGAERFICAEALFDPSLVGLEAYGIHQIIEQSVEKCDSNIRKDLYGNIVLSGRSTMFPVPGLVVLS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00732 261 SUPERFAMILY Actin-like ATPase domain 148 253 IPR043129 -
Pte19g00732 261 PRINTS Actin signature 27 36 IPR004000 -
Pte19g00732 261 PRINTS Actin signature 50 61 IPR004000 -
Pte19g00732 261 PRINTS Actin signature 85 103 IPR004000 -
Pte19g00732 261 PRINTS Actin signature 141 160 IPR004000 -
Pte19g00732 261 PRINTS Actin signature 116 129 IPR004000 -
Pte19g00732 261 Gene3D Actin; Chain A, domain 2 35 73 - -
Pte19g00732 261 FunFam Actin, alpha skeletal muscle 2 168 - -
Pte19g00732 261 ProSitePatterns Actins signature 1. 54 64 IPR004001 -
Pte19g00732 261 Gene3D - 216 253 - -
Pte19g00732 261 Gene3D Actin; Chain A, domain 4 160 214 - -
Pte19g00732 261 PANTHER ACTIN 8 159 IPR004000 -
Pte19g00732 261 SMART actin_3 6 259 IPR004000 -
Pte19g00732 261 Pfam Actin 5 163 IPR004000 -
Pte19g00732 261 SUPERFAMILY Actin-like ATPase domain 5 154 IPR043129 -
Pte19g00732 261 Gene3D - 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00732 Pte-Chr19 5868613 5871247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00732 1 253 Cytoskeleton Gene Families AT3G12110 57.605 8.67e-115 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00732 K10355 - nnu:104598081 354.369