Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00729 ATGAAAGACTACATATGCAACAGGTGTCATGGAACAAAGCCAGCCTTGATGATGGTGCTGGTGCAAATTTCATTTGTTGGGGTCAATGTCTTGTATAAGCTTGCTGTCAACGATGGGATGAGCTTGAAAGTAGTTGTTGCCTACCGCTGTATCTTTGCAACAGCTTTCATAGCACCGCTTGCTCTCATTCTGGAAAGAAAAAACAGGCCAAAGATGTCGTGGATGGTGCTTTTTCAAGCTTCCCTATGTGGACTGTTTGGGGGAGCTTTGGTTCAGAACTTGTACTTGGAGTCCCTAGCTCTAACATCAGCGACATTTGCCTCCGCCATGGCCAACCTAATTCCAGCCATTACATTTGTCTTGGCAGTCTCCTTTGGATTAGAGAGATTCAATTTGGGAACAGTTGCTGGAAAGGCAAAAACTATTGGGACATTGACGGGAATAGGTGGAGCTATGCTCATGACATTTTATAAAGGTGTTGAAATCAATATCCTCTCAACCCATTTCAATCTTTTGCAAATGAATCACAATCAGCATCACCATGTTGCAACACCAAATGCTTCATCCACAAGGAGTCATTTATTGGGTTCCCTTTCTTCTCTTGGTGGTTGCCTATCTTATGCTCTCTGGCTTATTATCCAGACGAAGATGAGCGCAAGATACCCGAGTCATTACACAAGCACTGCTTTGATGTCTTTCATGGCAGCAATCCAAGCAAGTGTGTTTGCTTTATGTACTGAAAGAGATTGGAGCCAATGGAGATTGGGTTGGAACGTTAGGCTGTTAACTGTGTCTTATGTGGGAATAGTGGCTTCTGGACTTGTGACTGTCCTTATTGCTTGGTGTGTAAACATGAGAGGGCCATTATTTGTCTCCGTTTTCAGTCCCTTGATGCTAGTTCTTGTAGCCATTGTGGGTTCCTTAGTCTTGGATGAGAAGCTGCATTTAGGAAGTATACTTGGAGCAGTGTTGATAATTTGTGGGTTGTACCTTGTGATATGGGGTAAGGGCAAAGAGATGAAGAAAATCACACAACTAGTTCCCTCAAGCTGCTTGAATCAATCAGACAATGTAGAGGTCATTGTCGTGCCAACTTCCGAAGATAAAAGCTTTGCTTCAAATCAAGTAGATCTGTCCAAAAATGGATGA 1149 0.4299 MKDYICNRCHGTKPALMMVLVQISFVGVNVLYKLAVNDGMSLKVVVAYRCIFATAFIAPLALILERKNRPKMSWMVLFQASLCGLFGGALVQNLYLESLALTSATFASAMANLIPAITFVLAVSFGLERFNLGTVAGKAKTIGTLTGIGGAMLMTFYKGVEINILSTHFNLLQMNHNQHHHVATPNASSTRSHLLGSLSSLGGCLSYALWLIIQTKMSARYPSHYTSTALMSFMAAIQASVFALCTERDWSQWRLGWNVRLLTVSYVGIVASGLVTVLIAWCVNMRGPLFVSVFSPLMLVLVAIVGSLVLDEKLHLGSILGAVLIICGLYLVIWGKGKEMKKITQLVPSSCLNQSDNVEVIVVPTSEDKSFASNQVDLSKNG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00729 382 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Pte19g00729 382 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Pte19g00729 382 PANTHER WAT1-RELATED PROTEIN 13 345 IPR030184 GO:0016020|GO:0022857
Pte19g00729 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 154 - -
Pte19g00729 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00729 Pte-Chr19 5825320 5830253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00729 13 359 Nodulin-like Gene Family AT1G25270 45.299 1.40e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00729 - - qsu:112005265 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00729 19 5825320 5830253 Pte19g00729 19 5825320 5830253 RCT