Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00723 ATGATGTGTTGTAACAGATGTAGTTGTACTCGTTGGTCCTTCCCTCTATTCTCCTTTTCCATTGCTCCACGTCCTCTTTCGCACGTGAATAACGTTACTGTTAGTGTTGTTCCTGTGTATATCAATCTCAATCTCAAGCACAAACGAATTGCTTTGTTTGCTACTGAAGAATCCAATACTTCTTCGTCTTTGACATCTTCGTTTCAATTAGAGGAAGCCCAGCAAGCTGTTTCAGAACACCTTCAACGATTTGGGGTACCCCATCATGATTCTATCTCCATTGCTTCTAATTGTCCCGTGTATTTGAAGAGGTTGCTCCAGGGAGTTCAGGAAATGGATGAACTTTTGCTCTTGGATAATCAGTTCAATGATGGAGGAACTATGAATAATCCTCGGTTGAGCTTTAGAGATAAAGTGATGGATTATCTCCAAAATCAGAAATCGGGCAATGCTAAAGTTGCCTTCTTGGAGAGTATTGGGCTGACATTTTCTTCTGCTATGAATGTCTCTTGGTATCTTTCCTCAGAGGCACTTCCAGCACTCATTCATAAGGTTAACTATTTGAAGGAAGTGTTCTTTTCTGGAGATGAGAACGATGCACGCCTTGTAAAAAATGCACGACGGATGATGAGTCAGTTATCTATTCCCGCTGATGAGGATTTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAAGCGTGGAGGTCTGAACATGTTGGGGTCGAACAAGGCCTCTTTCAAATGTCTTTTAGAATCATTTCCTCGCCTGCTCCTTCTGTCAGTGGAAATCAACATAAAACCTGTGGCAGAATTCCTAGAGAACATTGGGATTCCTAGAGAGCGCTTTAGAAACATAGTATTACTGTTTCCTCCACTTCTTTTTCTAAGTGCCGGCAGCATTGAGACTAGAGTTAGAGCCTTAAAAGAGATTGGCTTTGAGGACAAAGATTATGGCAAGTTACTGCTAAAATATCCATGGGTTCTTTGTAGAAGCATCCAGGAGAATTATAATGAAGTCAACTCTTTGTTTAGTCTACAGATGGTTCCAAAATCAAGTGTTGACCGTGGAATCAAAAGTTGGCCTCATCTGTTGGGCTGTTCGACCAGCAATTTGAACAAGATGGTTCGAACGTTGGGAGGACTAGGAGTCCACAACAGGAAGCTAGGCCCGGTTATTGCTCAAAGCCCTCAACTACTCCTACAAAATCCCCAACAATTCCTTCAGGTTGTTTCATTTTTTGAAGAACTGGGATTTGATATGGAAGTTCTTGGTAAAAAGCTTGTTCGCTGTCCAGAAATTTTTTCTGCCAGCGTTGAGGATACTCTAAAGAGAAAGATTGAATTCCTCATCAATATTGGTGTTTCTGAGGGCTCTCTTCCTCGTGTTATTAAGATGTACCCAGAAATTCTTGTGTCTGACACTGAAAAGACTATACGGCCTCGGATTACATACCTGTTGAATGTGGGACTGTCAAGAAAGGATATTACATTCATGGTGAGCAGATTTTCTCCACTGCTTGGATACAGCATTGAGGAAGTACTGAAACCGAAATTGGAATTCTTGGTGAGAACAATGAAGAGACCAGTAAAAGATTTGGTAGGTTATCCTAGGTATTTTAGCTATTCATTGGAGAAAAGGATCAAGCCAAGATTCTGGGTACTGAAAGGGAGGAATGTTGAATGTAGTTTAAAGGATATGCTAGGGAAGAATGATGAAGAGTTTGCTAGTGAATTTATGGGCTTGGGAAGGATTCCTGCATCTCTGCAATAG 1776 0.411 MMCCNRCSCTRWSFPLFSFSIAPRPLSHVNNVTVSVVPVYINLNLKHKRIALFATEESNTSSSLTSSFQLEEAQQAVSEHLQRFGVPHHDSISIASNCPVYLKRLLQGVQEMDELLLLDNQFNDGGTMNNPRLSFRDKVMDYLQNQKSGNAKVAFLESIGLTFSSAMNVSWYLSSEALPALIHKVNYLKEVFFSGDENDARLVKNARRMMSQLSIPADEDLQQTLSFFEKVEAKRGGLNMLGSNKASFKCLLESFPRLLLLSVEINIKPVAEFLENIGIPRERFRNIVLLFPPLLFLSAGSIETRVRALKEIGFEDKDYGKLLLKYPWVLCRSIQENYNEVNSLFSLQMVPKSSVDRGIKSWPHLLGCSTSNLNKMVRTLGGLGVHNRKLGPVIAQSPQLLLQNPQQFLQVVSFFEELGFDMEVLGKKLVRCPEIFSASVEDTLKRKIEFLINIGVSEGSLPRVIKMYPEILVSDTEKTIRPRITYLLNVGLSRKDITFMVSRFSPLLGYSIEEVLKPKLEFLVRTMKRPVKDLVGYPRYFSYSLEKRIKPRFWVLKGRNVECSLKDMLGKNDEEFASEFMGLGRIPASLQ* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00723 591 PANTHER CGI-12 PROTEIN-RELATED 153 383 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 Gene3D Transcription termination factor 3, mitochondrial 342 584 IPR038538 -
Pte19g00723 591 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 285 315 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 356 386 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 391 421 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 426 457 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 462 493 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 498 530 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 SMART mt_12 531 562 IPR003690 GO:0003690|GO:0006355
Pte19g00723 591 FunFam Mitochondrial transcription termination factor family protein 371 584 - -
Pte19g00723 591 Pfam mTERF 272 577 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00723 Pte-Chr19 5785612 5790494 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte19g00723 mTERF 8e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00723 K15031 - qsa:O6P43_022473 657.521