Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00722 ATGGCGTCGTCTAAGGTGGTGACGACGAGTCCTGATCTGCCAAGGCAGTCTTCTGCTTGTTCCCTTTTAACGCTAATGAGCGATCTTCAACAAACTGAATCTTCTAAAAACTCATTGGGTTCAGTCAACATGGATGACTTTATGAAGTCTTTCTTCCCTCCGTCTGAAACCAATCCGACCCTTTTCGGCTCCGACCCGAATTTCAACTCTGTAGTTGGTGGTGGTGGGAAGATGGAGGAGGAGGTGTGGAAGGAGATCGCGGCCGGGGGTGATCAGAGGCGGGTGGTTACTGAAGAGTCAGGGTATAAACAGATGACTTTGGAGGATTTCTTGACGAAAGCTGGTGCTGTGAGAGAAGAGGATGTCAAAGAGGCTGTTTCTGTAGTGACGGGTCCAGTGAGGTATGGGGTGAGCTCAGCTACTGCAACCCAGAGTGGCGGTCAGTTTGCTGTGGTTCCGGTGCCGGCACCTGCGGTGGAAGGATCTTCACTGATGGGGTTTGGAAATGGGACTGATAGGAATGGTGCAGGGGTGGGAAGAGGAAGAGGAAGAGGGAAGAGAAGATCCGTACCAGAACCGGTTGATAAGGCCACTGAATTGAAACAGAGAAGAATGATCAAGAACAGAGAGTCTGCTGCTAGGTCGAGGGAGCGCAAGCAGGCATACACGGTTGAACTGGAGTGTCTAGTCACCCAGCTGGAAGAGGAGAATGCTCGTCTTTTGAGAGAAGAGGCTGAGCAGAACAAACTGAGGCTCAAGCAGCTCGTGGAGAAACTTGTTACAGTTTTGGAGAAGTCTAAACCACCGCGAAAACTTCGAAGAGTGAACTCAACGGAATGTTGGAGAAGACTTTTGCCACCCTGCGTGAGTGAATCATCAGACGCACACAAAAAGTATCTTGATGAGAACAAGAAGTTGATATTGGCAATATTGGACAATCAACATCTTGGTAAACTAGCTGAATGTGCCCAGTATCAGGCGCAGCTTCAAAAGAATTTGATGTACTTGGCTGCAATTGCCGATGCTCAACCGCAGGCACCAACAATGCCTCCTCAGATGCCCCCACATCCCGCCATGCAACAAGGAGGATTCTATATGCAACATCCTCATGCCGCCGCTGCCATGATGGCTCAGCAACCAGGTATGTTTCCCCCAAGGATGCCAATGCCCTTTAACAATCCACACCAAATGCAGGAGGCTCAGCAATTACAACAGCAGGCAATTCAAGCTCAAATGGGTTTAAGACCTGCAGGAGTGAGTAATGGCTTGCACCCTATCCATACTGAGGCCACTCTTGGAGGTGGGAGTGGCCAGCCTGCTTCTAATACAGGCCCCAATGATGCACGTGGAGGAAAGAAGCAAGACATATCTGAGGGAGGAGCAGCAGGCAGTGGTGGCCAAGGCGGCTCAGCTGGTGGGCATAATGGTGGCGATGGGGAACCATCTTATTTGAAGGGTAAAGATGACGCAAAGTGA 1476 0.5034 MASSKVVTTSPDLPRQSSACSLLTLMSDLQQTESSKNSLGSVNMDDFMKSFFPPSETNPTLFGSDPNFNSVVGGGGKMEEEVWKEIAAGGDQRRVVTEESGYKQMTLEDFLTKAGAVREEDVKEAVSVVTGPVRYGVSSATATQSGGQFAVVPVPAPAVEGSSLMGFGNGTDRNGAGVGRGRGRGKRRSVPEPVDKATELKQRRMIKNRESAARSRERKQAYTVELECLVTQLEEENARLLREEAEQNKLRLKQLVEKLVTVLEKSKPPRKLRRVNSTECWRRLLPPCVSESSDAHKKYLDENKKLILAILDNQHLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPTMPPQMPPHPAMQQGGFYMQHPHAAAAMMAQQPGMFPPRMPMPFNNPHQMQEAQQLQQQAIQAQMGLRPAGVSNGLHPIHTEATLGGGSGQPASNTGPNDARGGKKQDISEGGAAGSGGQGGSAGGHNGGDGEPSYLKGKDDAK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00722 491 SMART brlzneu 196 265 IPR004827 GO:0003700|GO:0006355
Pte19g00722 491 Coils Coil 219 262 - -
Pte19g00722 491 Pfam bZIP transcription factor 201 254 IPR004827 GO:0003700|GO:0006355
Pte19g00722 491 SUPERFAMILY Leucine zipper domain 201 248 IPR046347 GO:0003700|GO:0006355
Pte19g00722 491 CDD bZIP_plant_BZIP46 201 247 - -
Pte19g00722 491 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Pte19g00722 491 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 243 IPR004827 GO:0003700|GO:0006355
Pte19g00722 491 MobiDBLite consensus disorder prediction 416 491 - -
Pte19g00722 491 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 275 IPR043452 GO:0003700|GO:0045893
Pte19g00722 491 MobiDBLite consensus disorder prediction 164 195 - -
Pte19g00722 491 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 198 259 - -
Pte19g00722 491 Gene3D - 199 264 - -
Pte19g00722 491 MobiDBLite consensus disorder prediction 434 448 - -
Pte19g00722 491 Pfam SSXT protein (N-terminal region) 297 345 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00722 Pte-Chr19 5775641 5781992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00722 80 281 bZIP Transcription Factor Family AT5G44080 44.712 9.58e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte19g00722 SSXT 4.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00722 K14432 - qsa:O6P43_012265 282.337