Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00717 ATGGGGAAACAACAAGATCAGATAGATCGTATGGAAATTAATCTATCACTCAAGATAGATTCTTCAACATATGAAAACGAAGAAACGTATCTAGAGAATGAGACTAGAGTTACAACAAATACTCAGGTGGATGGTGCTCAACAAGAACAGTCACAGGAACAATATGATGATAAACAAAAAGAATTAGAGGCTGCTGAAGGCACAACAGGTGAAGTAGAAGATGAAGCAACGCAAGGGGATGAAGCTTCGCAACCCAGCATGAAAAAGGAAGAGTTAAGTTTGCTACAAACGGAGATGGATCGCATGAAAGAAGAAAACAAGCTTTTGAGGAAGGTAGTGGAGCAAACAATGAAAGATTATAGTGATCTTCAAATGAAATTTGCAGCCTTGCGGCAAAGTAATCAACATAAGGATCCTCAAGTATCTCTCTCACTACAAAGCAATACTCACAATCCCATAGAAGGACCATCCAGGACTCTGAAAGTCTTAGAAGCCAAGAATCAGCAAGTTGCATCTTCATCCAATGATGATACCAGTATTAGTGAGGATGAATTGGGTTTGTCATTACTGTTACAGACAAGCCAACATGAAAAGGAGGAAGACAAAGAGGAGACAAAACAGGAATCAGGGAGCTTTCCATCAGTACCAAATAACAAGAAGCAAAGAATTGATTCGCCAGGTGGTATAACTACACAGCTTGCCTCCCCACCAAATAGAAAGGCTAGGGTTTCTGTCAGAGCAAGATGTGAAACAGCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGTCAGAAAATTGCAAAAGGAAACCCATGTCCCCGCGCCTATTATCGTTGCACAGTTGCTGCAGGCTGTCCTGTGAGGAAACAGGTACAAAGATGCCTGGAGGACATGTCCATACTGATTACAACTTACGAAGGAACACATAACCATCCATTACCAGTTGGTGCAACAGCTATGGCTTCTACTGCCTCTGCAGCAGCTTCCTTCATGTTGTTAGATTCTAGCAATCCAGACGCAGTTGGCACCTCAAATTTCACCCAAGTCTCCCTTCCTTACCAAAACTTCCATTCAATTTATCCAACTTCTAATAACCTGTCAAACCTTAGAAGCATAAACCCTATGGACCCTTCTAAAGGGATTGTTCTCGATCTTACCAATAATCTAATAGATCCTGCTATGAAATTCCCCAAGAACCCTATTGCTACCTCCTCAACTTCAGCATCTCAATTGGGTTTTTCTTGGATGCCAAACAAATCAAGTTACCAAAGTGGCAGCATTTCTATGGGACCTAATATTTTTTCAAGCCCTAGAGCTGGAATGGTCAACGAGGATGGGAAAGCAGAAGATAGTAGTACGCCACTAGCAGACAATGTGTCTGTTATTGCTTCAGATCCCAAGTTTAGGGTTGCAGTTGCAGCAGCCATAACATCTCTCATTAATACTAACAAAGAAAATGGAGTGAACCATCCCATACGCACTTCTTCTTTAGGCTCTAGGGATGGAGAAGCTGGCGGCTCAAGCAGTAGCAACAACTGGGTGCTTGAATCTCTCTCAGCCAATGGTAAAGCCCTTTAA 1581 0.4213 MGKQQDQIDRMEINLSLKIDSSTYENEETYLENETRVTTNTQVDGAQQEQSQEQYDDKQKELEAAEGTTGEVEDEATQGDEASQPSMKKEELSLLQTEMDRMKEENKLLRKVVEQTMKDYSDLQMKFAALRQSNQHKDPQVSLSLQSNTHNPIEGPSRTLKVLEAKNQQVASSSNDDTSISEDELGLSLLLQTSQHEKEEDKEETKQESGSFPSVPNNKKQRIDSPGGITTQLASPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAAGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPDAVGTSNFTQVSLPYQNFHSIYPTSNNLSNLRSINPMDPSKGIVLDLTNNLIDPAMKFPKNPIATSSTSASQLGFSWMPNKSSYQSGSISMGPNIFSSPRAGMVNEDGKAEDSSTPLADNVSVIASDPKFRVAVAAAITSLINTNKENGVNHPIRTSSLGSRDGEAGGSSSSNNWVLESLSANGKAL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00717 526 Gene3D WRKY domain 239 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00717 526 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00717 526 Coils Coil 48 75 - -
Pte19g00717 526 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00717 526 MobiDBLite consensus disorder prediction 194 208 - -
Pte19g00717 526 Coils Coil 92 119 - -
Pte19g00717 526 MobiDBLite consensus disorder prediction 194 242 - -
Pte19g00717 526 MobiDBLite consensus disorder prediction 133 156 - -
Pte19g00717 526 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 61 485 IPR044810 GO:0003700
Pte19g00717 526 MobiDBLite consensus disorder prediction 486 514 - -
Pte19g00717 526 SUPERFAMILY WRKY DNA-binding domain 247 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00717 526 FunFam probable WRKY transcription factor 31 239 316 - -
Pte19g00717 526 MobiDBLite consensus disorder prediction 133 155 - -
Pte19g00717 526 MobiDBLite consensus disorder prediction 51 67 - -
Pte19g00717 526 MobiDBLite consensus disorder prediction 209 238 - -
Pte19g00717 526 MobiDBLite consensus disorder prediction 19 50 - -
Pte19g00717 526 Pfam WRKY DNA -binding domain 255 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00717 526 MobiDBLite consensus disorder prediction 19 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00717 Pte-Chr19 5734386 5736995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00717 95 395 WRKY Transcription Factor Family AT1G68150 49.175 3.82e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte19g00717 WRKY 3.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00717 - - qsa:O6P43_031557 530.791