Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00712 ATGCCTCTGTCCAAACGAAATAGACAAGTTACTCTGTCAAAGACAAAGAAGAAAGGAAGGGGAAATAAGGAAGCTTTAGTTAATGCAGTTTCTGAAGCAATTGAGAAGTATAATTTAGTCTACGTGTTCTCTTTTGAGAACATGAGAAATCTCAAGTTTAAAGAGTTCAGGGAGCAACTGAAATCTACAAGCAGATTTTTCCTGGGGTCAAACAAAGTCATGCAGGTTGCTTTAGGTCGATCTGCTGCTGATGAGATTAGGCCAAACCTGAATAAAGTTTCAAAGCTTCTCCGTGGGGATACAGGACTTTTCTTCACAAATTTGCCTCAAGAAGAAGTTGAAAGGACTTTTAATGGATATGAAGAACATGAATTTGCACGAACTGGAAGCATTGCCTCTGAAAAGGTGGAGCTCAAGGAAGGTCCTTTGGAGCAGTTCACACATGAAATGGAACCCTTACTGCGCAAGCAAGGGATGCCAGTGCGTTTGAACAAAGGAATTGTTGAGTTAATTGCTGATTTTGCTGTTTGTGAGGAGGGGAAGCCGCTATCTCCTGAGGCATCTCACATATTGCGTTTTCTTGGAATCAAGATGGCGACCTTTCGACTTCACCTGACATGCAGATGGTGTAATGGTCATTTTACGGACTACATTTGTGGAGGACCAGATGACTCCGATGTTGAATCTGCATGA 693 0.4199 MPLSKRNRQVTLSKTKKKGRGNKEALVNAVSEAIEKYNLVYVFSFENMRNLKFKEFREQLKSTSRFFLGSNKVMQVALGRSAADEIRPNLNKVSKLLRGDTGLFFTNLPQEEVERTFNGYEEHEFARTGSIASEKVELKEGPLEQFTHEMEPLLRKQGMPVRLNKGIVELIADFAVCEEGKPLSPEASHILRFLGIKMATFRLHLTCRWCNGHFTDYICGGPDDSDVESA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00712 230 MobiDBLite consensus disorder prediction 1 21 - -
Pte19g00712 230 FunFam Ribosome assembly factor mrt4 125 198 - -
Pte19g00712 230 Gene3D - 30 210 IPR043141 -
Pte19g00712 230 FunFam Ribosome assembly factor mrt4 29 133 - -
Pte19g00712 230 CDD Ribosomal_P0_like 22 184 IPR033867 GO:0000027
Pte19g00712 230 Gene3D - 125 198 IPR043164 -
Pte19g00712 230 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Pte19g00712 230 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Pte19g00712 230 Pfam Ribosomal protein L10 20 120 IPR001790 -
Pte19g00712 230 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00712 Pte-Chr19 5696092 5701300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00712 32 212 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 22.703 2.26e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00712 K14815 - qsa:O6P43_012253 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00712 19 5696092 5701300 Pte19g00712 19 5696092 5701300 RCT