Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00682 ATGGCATTTGCTGGTATCGGAAATGGAGGTGCCGGTAGCTCAAGCGCTGTTAATGGCTTCAGGGGTTCATCCAGCTCTGTGGATTGGCTTGGGAGAGAAATGCTCGAGATGAGACTGAGGGACAAGGTGGAGCATGAAGAAGACAGAGACAGTGAACCGGAAATAATTGACGGTGTAGGTGCTGAAGCAGGACATGTCATAAGGACTACTATTGGTGGACGAAGTGGTCAGAAACAGACTATTAGCTACATTGCGGAGCATGTGGTTGGAACCGGTTCTTTTGGGGTTGTTTTCCAAGCAAAATGTAGAGAAACTGGAGAGATCGTGGCTATCAAGAAGGTTCTACAAGACAAGCGCTACAAAAATAGGGAGCTACAGATTATGCAGATGTTGGATCATCCAAATATTGTTTCTCTTAAGCATTGTTTCTTTTCAACAACAGACAAAGAAGAGCTCTATCTCAACCTTGTCCTTGAATATGTTCCCGAATCTCTTAATCGCATAGCAAGGAATTTTAACCGGGTTAACCAGCGAATGCCTTTGATATATGTTAAGCTCTATACATATCAGCTTTGCAGAGCACTTGCCTACATTCATAATTGCATTGGGATCTGCCACCGTGACATCAAGCCACAAAATTTACTAGTGAATCCCCATACCCATCAGCTGAAGCTCTGCGATTTTGGGAGTGCAAAAGTGCTGGTAAAAGGAGAACCAAATGTTTCATATATCTGTTCAAGATATTATCGTGCTCCAGAACTCATATTTGGTGCCACAGAGTATACATCTGCCATAGACATATGGTCTACAGGTTGTGTAATGGCTGAATTACTGCTAGGACAGCCCTTGTTTCCTGGTGAGAGTGGTGTCGACCAACTAGTTGAGATCATTAAGGTTTTAGGAACTCCTACCAGGGAGGAGATAAAATGCATGAATCCTAATTATACAGAGTTTAAGTTTCCTCAGATAAAGCCACATCCATGGCACAAGGTCTTTCAAAAACGTTTACCCCCAGAAGCAGTAGACCTAGTTTGCAGGTTCTTTCAGTACTCACCAAATCTGCGATGCACTGCTCTGGAAGCATGTATTCACCCTTTTTTCGATGAACTGAGGGATCCAAACACTCGCCTTCCCAATGGCCGCCCTCTTCCTCCCCTCTTCAGTTTTAAACCACAAGGTAACTTTAGAGCACAAAATTTTTTACATAACATGCTGGTTGTCGTGCTTAGATTCATTGATGAGCACGATTACCAATTTTATGTAGCTTTTGCTTTGCTAAAATTACTGACGGCTTTTATGAAGTATCTATCTGTATATACTTGTTTGCATGTCTATCATTTATTTACTAAAAGAAAGAAGTAG 1362 0.4207 MAFAGIGNGGAGSSSAVNGFRGSSSSVDWLGREMLEMRLRDKVEHEEDRDSEPEIIDGVGAEAGHVIRTTIGGRSGQKQTISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVSLKHCFFSTTDKEELYLNLVLEYVPESLNRIARNFNRVNQRMPLIYVKLYTYQLCRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTSAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFSFKPQGNFRAQNFLHNMLVVVLRFIDEHDYQFYVAFALLKLLTAFMKYLSVYTCLHVYHLFTKRKK* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00682 453 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00682 453 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00682 453 ProSitePatterns Protein kinases ATP-binding region signature. 89 113 IPR017441 GO:0005524
Pte19g00682 453 FunFam Shaggy-related protein kinase kappa 163 410 - -
Pte19g00682 453 Pfam Protein kinase domain 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00682 453 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 52 393 - -
Pte19g00682 453 CDD STKc_GSK3 78 370 IPR039192 -
Pte19g00682 453 FunFam Glycogen synthase kinase-3 beta 68 162 - -
Pte19g00682 453 Gene3D Phosphorylase Kinase; domain 1 68 162 - -
Pte19g00682 453 SUPERFAMILY Protein kinase-like (PK-like) 82 398 IPR011009 -
Pte19g00682 453 Gene3D Transferase(Phosphotransferase) domain 1 164 408 - -
Pte19g00682 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00682 Pte-Chr19 5486497 5491192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00682 89 375 Core Cell Cycle Gene Families AT1G76540 34.915 2.78e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte19g00682 Pkinase 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00682 K03083 - jre:108983720 754.592