Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00680 ATGACAGGAGAAGCCAACGACGTTGGAGGTAGGGATGACTTGGCCTCGGTATCTTCTAAAGGCAAGGTTAAATTCTTATGCAGCCATGGTGGGAAAATTCTCATTAGACCCACAGATGGCTACCTCAAATATGTTGGAGGAGAGACTCGTGTCATTGCAGTTGCACGTGATATCAATTTCTCAGAGCTAATGAAAAAGCTCAATGGTTCCATCGGCGGCAACATGGTGCTGAAGTACCAGCTGCTGCCTGAAGATCTTGAAACTTTAGTCACAGTAAAAACAGATGAAGATCTTAAGTACATGTTTGATGAACATGACCGCCATGAAAGCGAAGGAACTCCAAGGCTTCGAACTTTCCTATTTCCTGCCCCAGCAAAGGTAGTCGACAACTCGGCCACGACGACAATGGAACCACATGCATTTGAACAACATTATTTTGATGCCATCAATGGTGTCACCAATACTACAACCTCTATGATAAGACGCTCTCCTATGAAGACTTTTAAAGCTTCCTCATCTTGCTCTTCCCCAAGGTCCCTTTCTCCCTCAAGTACCAGATCCTCTATGCATAGAGTGCAAAGCTACACAAGCTCTTCCCCAAGATCCCTTTCTCCCTCAAGTACCAGACCCTCTATGCATAGAGTGCAAAGCTACACAAGCTCTTCACCGAGATCCCTTTCTCCCTCAAGTACCAGACCCTCCATGCATAGAGTGAAAAGCTCTCCTTGTGTAGCCTATCACAACCACACATTCCACCAGCATGATAGCACTCCGTCTTCCAGACTGCCACCTGATTTACCAAATGGTGGCGGGATGGGAAAGTTAAGTCGAGCTTTCTCATCATGCAAAGCAGCAGCAAACCCTTTTAGCGGTCACTACTCAAAAAACAGACATTATCATGAAGGACATAGAGGTTGCAGCCAGTGTGCTTACCATGATGAAGGCGTCACGCACGTCGATGGTCAGCATAATGGAGTAGAAAGCTGTCCTCAGAGTCCCAGACGCATTATATGGGAATGA 1020 0.4627 MTGEANDVGGRDDLASVSSKGKVKFLCSHGGKILIRPTDGYLKYVGGETRVIAVARDINFSELMKKLNGSIGGNMVLKYQLLPEDLETLVTVKTDEDLKYMFDEHDRHESEGTPRLRTFLFPAPAKVVDNSATTTMEPHAFEQHYFDAINGVTNTTTSMIRRSPMKTFKASSSCSSPRSLSPSSTRSSMHRVQSYTSSSPRSLSPSSTRPSMHRVQSYTSSSPRSLSPSSTRPSMHRVKSSPCVAYHNHTFHQHDSTPSSRLPPDLPNGGGMGKLSRAFSSCKAAANPFSGHYSKNRHYHEGHRGCSQCAYHDEGVTHVDGQHNGVESCPQSPRRIIWE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00680 339 MobiDBLite consensus disorder prediction 165 240 - -
Pte19g00680 339 MobiDBLite consensus disorder prediction 165 237 - -
Pte19g00680 339 Gene3D - 43 121 - -
Pte19g00680 339 SMART PB1_new 37 123 IPR000270 GO:0005515
Pte19g00680 339 SUPERFAMILY CAD & PB1 domains 39 125 - -
Pte19g00680 339 CDD PB1_UP2 26 121 - -
Pte19g00680 339 PANTHER OS05G0427100 PROTEIN-RELATED 18 258 - -
Pte19g00680 339 Pfam PB1 domain 42 121 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00680 Pte-Chr19 5467762 5469204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00680 22 159 MAP Kinase Kinase Kinase AT3G46920 41.259 4.46e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00680 - - qsa:O6P43_031475 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00680 19 5467762 5469204 Pte19g00680 19 5467762 5469204 RCT