Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00676 ATGTTACCCTTTATGGTTTTCTTCCTACTCTCTCTTCTGGGGACCTCTTCTTCTTCTGCTGTCTCTTTGCTCAGAGATTTCCATGTCTTACTTTCACTTAAGCAAGAATTTCAATTCCCTGAACCCGTTCTGAGTACTTGGCGTGCTTCCAAGCTCAGCTCATTTTGTAATTCATGGACTGGAATACAGTGCCTTGGGGGGAGAGTTGTTTCAGTGGACTTAACAGACTTGAATCTATCTGGTTCGGTCTCACCTTTAATCTCTAGACTTGACAGGCTTACCAATCTTTCACTAGCAGGAAATAACTTCACCGGCACCATTGAGCTATCGAGTATGAGAAGCCTGCGATTTCTAAACATTTCAAACAACCAGTTCAGTGGTAGCTTGGATTGGAATTACTCAACCTTGGCAGACCTGGAAGTGTTTGATGCCTATAACAACAACTTCACTTCTGCACTTCCTGTTGGGGTTGTGAACTTGAACAAACTCAGGTACTTGGATCTCGGAGGCAATTATTTTAACGGAGAAATCCCAGTGAGCTATGGAAATTTGTTTGAATTGCAGTATCTGTCACTTGCAGGCAATGACCTACATGGAAAAATTCCTGGTGAGCTAGGCAACCTCACAAACCTGAGAGAAATTTACTTAGGCTACTACAATGTATTTGAAGGTGGTATCCCTGTGGAGTTTGGCAAATTGGTCAATTTGGTTCACATGGATCTTTCAAGTTGTGAACTTGATGGTCAAATTCCCAGAGATTTGGGGAACTTGAAAGCACTTGACACACTATACTTGCATATCAATTTGCTTTCAGGTTCAATTCCAAGGCAATTAGGCAATCTCACCAATTTAGTCAACCTGGACTTATCAAACAACGTGCTGACAGGAGAAATCCCATATGAGTTCATCAACCTCAAGCAACTCAATCTTTTGAATCTCTTCATGAACAAATTGCATGGTTCAATCCCGGACTACATTGCAGACTTTTCAAACTTGGAGACACTTGGCCTGTGGATGAATAATTTCACAGGAGAAATCCCTCAGAATCTTGGCCAAAATGGGAGACTACAACTGCTTGATTTGTCATCAAATAAACTCACTGGTATAATCCCTCAAAGCTTGTGTTTCTCAAATCAACTTAGAACACTTATTCTTCAGAAGAATTTTCTCTTTGGACCTGTTCCTGAAAGTTTAGGAAAATGTTACAGTCTGACAAGAGTACGGTTGGGACAGAACTATTTGAATGGTAGTATACCAAGTGGATTCCTTTACTTGCCTAAGCTAAACTTGCTAGAGCTCCATAGCAATTACCTCTCAGGATCATTGGCTGAGAACAGTGACGGTGCAGCTACTCCTGTCAACCTAAGACAGCTTAATTTGTCAAACAATGCCTTGTCTGGTCCTTTACCATATTCCCTTTCAAATTTCTCTTCTATTGAGATGCTTCTGCTTAGTGGAAACCAATTAACTGGTCAAATCCCACCTTCAATAGGAGAACTCCATCAAGTGTTAACTCTTGATCTCAGCAGAAATTCACTATCTGGAGAAATCCCACATGAAATTGGAAATTGCTCTCATCTTACTTTCCTTGACATGAGCCAGAACAACCTCTCAGGTCCAATTCCACCGGGAATTTCAAACTTACGTATTTTGAATTACCTGAACTTGTCAAGAAACCATTTGAATCAAGCAATACCGAAATCAATAGGATCCCTGAAAAGTCTCACTATTGCTGATTTTTCCTTCAATGATTTCTCTGGTTTATTGCCAGAGTCAGGCCAATTTTCTCTCTTCAATGCCTCCTCTTTCGCGGGTAACCCTCAACTCTGCGGTCCGGTCCTCAATAATCCTTGCAATATCTCAACAATCACAATTACCCCCAGAAAAGGCCCAGCAGATTTCAAACTAATTTTTGTTCTTGGCCTATTGGCATGTTCAATGGTTTTTGTCTCTGCAGCTGTAGTGAAGGCTAAGACTTCCAAAAGAAACCGTACTGGTTCGTGGAAAATGACCACATTCCACAAGGTGGAATTCGCAGTCTCTGACATCCTTGAATGTGTCAAAGATGGAAATGTGATTGGTAGAGGAGGAGCAGGGATTGTATACCATGGGAAAATGCCAAATGGGGTTGAAGTTGCTGTGAAGAAGCTTCTTGGGTTTGGACATAACAGCCACGATCATGGGTTTAGGGCTGAAATTCAAACTCTCGGCAATATTCGTCATCGAAACATCGTCAAACTACTGGCCTTCTGTACCAACAAGGAAACCAATCTTCTAGTCTATGAGTACATGAGAAATGGAAGCCTAGGAGAGGCATTGCGTGGAAAGCAAGGTGCATTTCTAGACTGGAACTTGAGGTACAAAATTGCAACTGAAGCTGCTAGAGGACTTTGCTATTTGCATCATGATTGTTCACCATTGATTGTCCACCGTGATGTGAAATCAAACAATATACTGTTGAATTCAAGCTTGGAAGCGCATGTAGCCGATTTCGGGCTGGCAAAGTACTTGGTGGATTCTCAGTGCATGTCAGCAATTGCAGGTTCATATGGTTACATAGCACCAGAATACGCTTACACTTTGAGGGTGGATGAGAAAAGCGATGTGTACAGTTTCGGAGTAGTCCTGCTGGAACTTTTGACAGGAAGACGGCCTGTAGGTGATTTCGGTGATGGGGTGGACATTGTACAATGGTGTAAGAAAGCAACGAGTGGTCGGGGAGAAGAGGTGATGAACATAGTTGACATGAGACTCAAAATGGTTCCTAAAGATGAAGCCATGCACATATTTTTCATTGCCATGTTATGCGTTCAAGATAATAGTATTGAGCGGCCTACAATGAGAGACACAGTTCAAATGCTCTCAGAATTTTCACAACACCAGTCTCCAGATTTTGAATCTTCTTCTCGTTCCTTGATTCATCAATCATCATCTAAAAGCCATGGAAAAGAGAGAAAGGAATTGCAGTCCAACGTTTAG 2979 0.4173 MLPFMVFFLLSLLGTSSSSAVSLLRDFHVLLSLKQEFQFPEPVLSTWRASKLSSFCNSWTGIQCLGGRVVSVDLTDLNLSGSVSPLISRLDRLTNLSLAGNNFTGTIELSSMRSLRFLNISNNQFSGSLDWNYSTLADLEVFDAYNNNFTSALPVGVVNLNKLRYLDLGGNYFNGEIPVSYGNLFELQYLSLAGNDLHGKIPGELGNLTNLREIYLGYYNVFEGGIPVEFGKLVNLVHMDLSSCELDGQIPRDLGNLKALDTLYLHINLLSGSIPRQLGNLTNLVNLDLSNNVLTGEIPYEFINLKQLNLLNLFMNKLHGSIPDYIADFSNLETLGLWMNNFTGEIPQNLGQNGRLQLLDLSSNKLTGIIPQSLCFSNQLRTLILQKNFLFGPVPESLGKCYSLTRVRLGQNYLNGSIPSGFLYLPKLNLLELHSNYLSGSLAENSDGAATPVNLRQLNLSNNALSGPLPYSLSNFSSIEMLLLSGNQLTGQIPPSIGELHQVLTLDLSRNSLSGEIPHEIGNCSHLTFLDMSQNNLSGPIPPGISNLRILNYLNLSRNHLNQAIPKSIGSLKSLTIADFSFNDFSGLLPESGQFSLFNASSFAGNPQLCGPVLNNPCNISTITITPRKGPADFKLIFVLGLLACSMVFVSAAVVKAKTSKRNRTGSWKMTTFHKVEFAVSDILECVKDGNVIGRGGAGIVYHGKMPNGVEVAVKKLLGFGHNSHDHGFRAEIQTLGNIRHRNIVKLLAFCTNKETNLLVYEYMRNGSLGEALRGKQGAFLDWNLRYKIATEAARGLCYLHHDCSPLIVHRDVKSNNILLNSSLEAHVADFGLAKYLVDSQCMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWCKKATSGRGEEVMNIVDMRLKMVPKDEAMHIFFIAMLCVQDNSIERPTMRDTVQMLSEFSQHQSPDFESSSRSLIHQSSSKSHGKERKELQSNV* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00676 992 FunFam Leucine-rich repeat receptor-like kinase 25 134 - -
Pte19g00676 992 SUPERFAMILY L domain-like 354 612 - -
Pte19g00676 992 MobiDBLite consensus disorder prediction 977 992 - -
Pte19g00676 992 SMART serkin_6 687 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00676 992 MobiDBLite consensus disorder prediction 958 992 - -
Pte19g00676 992 PANTHER LEUCINE RICH REPEAT KINASE 2 311 958 - -
Pte19g00676 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Pte19g00676 992 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 764 971 - -
Pte19g00676 992 SMART LRR_typ_2 233 257 IPR003591 -
Pte19g00676 992 SMART LRR_typ_2 354 376 IPR003591 -
Pte19g00676 992 SMART LRR_typ_2 329 353 IPR003591 -
Pte19g00676 992 SMART LRR_typ_2 281 305 IPR003591 -
Pte19g00676 992 SMART LRR_typ_2 548 572 IPR003591 -
Pte19g00676 992 SMART LRR_typ_2 500 524 IPR003591 -
Pte19g00676 992 SMART LRR_typ_2 184 208 IPR003591 -
Pte19g00676 992 SUPERFAMILY RNI-like 71 412 - -
Pte19g00676 992 Gene3D Ribonuclease Inhibitor 134 219 IPR032675 -
Pte19g00676 992 Gene3D Ribonuclease Inhibitor 220 325 IPR032675 -
Pte19g00676 992 Gene3D Phosphorylase Kinase; domain 1 650 763 - -
Pte19g00676 992 ProSiteProfiles Protein kinase domain profile. 687 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00676 992 Pfam Leucine rich repeat 330 388 IPR001611 GO:0005515
Pte19g00676 992 Pfam Protein kinase domain 689 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00676 992 Gene3D Transferase(Phosphotransferase) domain 1 764 980 - -
Pte19g00676 992 Gene3D Ribonuclease Inhibitor 326 621 IPR032675 -
Pte19g00676 992 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pte19g00676 992 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 221 326 - -
Pte19g00676 992 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 622 - -
Pte19g00676 992 Gene3D Ribonuclease Inhibitor 25 133 IPR032675 -
Pte19g00676 992 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 135 220 - -
Pte19g00676 992 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 763 - -
Pte19g00676 992 MobiDBLite consensus disorder prediction 958 976 - -
Pte19g00676 992 SUPERFAMILY Protein kinase-like (PK-like) 678 954 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00676 Pte-Chr19 5444130 5447737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00676 19 990 Receptor kinase-like Gene Family AT5G65700 55.802 0.0 1057
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte19g00676 Pkinase 3.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00676 - - qsa:O6P43_031479 1540.4