Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00669 ATGGAACGATCAGATTTGCAAAACAACAAGCAAGGCAGCAACAACACCACAACTCACCCACAACAGCAAAAGCATCAGTTACCTTCTTCACAACTTGTGGTCCCCTTTGATGGCAGACCACCACCACCACCTTCATCATCATCTGCGCCAACTGGCGGACCATCCTCGGGTCCCTTCATGGGTTCCATGTCTAGTCAAGCTGGTATAACTCATGGGGTGCTCAAACCGACAGTTGCTTCTTCATCACCATCTACCTCCTCTTCAAATTCTTCTTCGTCGTCGTCGTCTACTTCGGCTGCTTCTGCACCTCATATTGATGCCTCCCTCGCCATCGCCACCAGATCTGAACCCAACCCCTCTTACCGATCAGCCCCCACCATCGATTCCTCTAAGAAAACTCAAGTTCATCACCAGCAGATATCAGTCTCCACTGGGACTGCCACTACTGCTACAGCTGCACCTCCTAAACGATCTACCAAGGACCGACACACCAAAGTGGATGGTCGTGGCCGTAGAATACGAATGCCGGCCACCTGTGCTGCGAGAGTGTTCCAATTAACTAGAGAATTGGGTCACAAGTCAGATGGAGAAACCATAGAATGGTTGCTTCAACAGGCGGAGCCGGCCATCATAACCGCCACTGGTACTGGTACAATTCCAGCGAATTATTCTACTCTCAATGTTTCACTTCGTAGCAGCGGGTCAACTCTCTCAGCTCCTCCGTCAAAGTCAGCTCCTCACGCGTTTCATGGGGCTTTAGCTCTTGCTCATCAGTCTCACTACGATGAAGGGTTTTCCCACACTCCCTTGTTAGGTTATCATCCTCAGCATCAGCATCAACACCATCATCAGCATCAGCACCCCTCTTTTCTAATGAGTGCAGATCAAATAGCAGAAGCACTTCCGAGTAGTGGTGGCGGTGGAGATGGTGGTGGAAATGACTCCTCAGAGAATTACATGAGAAAACGTTTCAGGGAAGATTTATTCAAAGATGATAGTCAACCACAGAATGATAGTGGTGGCGGTGGTGATGGTGAAGGAAGTTCACCCAAGGCTTTCAAAAGCAATTTGCAGTTTTCGAAGCAACAAGAGGTAGCAGGATCTTCTGGTCTTCTAAGGGCATCGAATATATTACCAGGCACAGCTATGTGGGCAGTAGCTCCTGCACCAACCACTGGTGCTGGCAGCACATTTTGGATGCTACCCGTGACAGGCAGTGCCAGCGGTGGACCTCCAGTTGCAGCCACTGCCACGTCTGTTTCTGGTTTATCAGAAACTCAAGGTTGGCCTTTTGTTCCTGCAGCAGCAAGTGGGACTGGAAATACTCTACAGTCTCCTGTACAATTCATGCCAAGGTTTAATCTTCCAGGTAGTCTGGAGTTTCCAGGTAGCCGAGCTAGTACATTGCAATTGGGTTCCATGTTAATGCAGCAACCTTCTCAACATCTTGGTTTGGGAGTGCCTGAGTCAAATATGGGAACGCTTGCTGCTCTGAATGCTTTTTCTAGAGGTGGATTGAATATGAATATGAGCTCTGTCCAGCAAAACCATCCATTAGAACAGCATCATCATCATCATCATCATCAACACCAACACCAACACCAACATCAACACCAGCAAAAAGCTAATGACAGTGGTGATGAAAACAATTCTCAGTGA 1659 0.4828 MERSDLQNNKQGSNNTTTHPQQQKHQLPSSQLVVPFDGRPPPPPSSSSAPTGGPSSGPFMGSMSSQAGITHGVLKPTVASSSPSTSSSNSSSSSSSTSAASAPHIDASLAIATRSEPNPSYRSAPTIDSSKKTQVHHQQISVSTGTATTATAAPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIITATGTGTIPANYSTLNVSLRSSGSTLSAPPSKSAPHAFHGALALAHQSHYDEGFSHTPLLGYHPQHQHQHHHQHQHPSFLMSADQIAEALPSSGGGGDGGGNDSSENYMRKRFREDLFKDDSQPQNDSGGGGDGEGSSPKAFKSNLQFSKQQEVAGSSGLLRASNILPGTAMWAVAPAPTTGAGSTFWMLPVTGSASGGPPVAATATSVSGLSETQGWPFVPAAASGTGNTLQSPVQFMPRFNLPGSLEFPGSRASTLQLGSMLMQQPSQHLGLGVPESNMGTLAALNAFSRGGLNMNMSSVQQNHPLEQHHHHHHHQHQHQHQHQHQQKANDSGDENNSQ* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00669 552 ProSiteProfiles TCP domain profile. 159 213 IPR017887 -
Pte19g00669 552 MobiDBLite consensus disorder prediction 114 155 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 519 552 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 327 353 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 520 536 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 114 167 - -
Pte19g00669 552 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 86 541 IPR005333 GO:0003700
Pte19g00669 552 MobiDBLite consensus disorder prediction 1 102 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 35 49 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 266 289 - -
Pte19g00669 552 Pfam TCP family transcription factor 158 285 IPR017887 -
Pte19g00669 552 MobiDBLite consensus disorder prediction 50 102 - -
Pte19g00669 552 MobiDBLite consensus disorder prediction 7 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00669 Pte-Chr19 5364015 5365673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00669 156 491 TCP Transcription Factor Family AT1G35560 44.606 3.24e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte19g00669 TCP 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00669 - - jre:109002313 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00669 19 5364015 5365673 Pte19g00669 19 5364015 5365673 RCT