Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00665 ATGCAGCTTCCTGCGTTGCTTTCCATTTTCCTGCTCCTTGTTTTTCAACCGAACCGGTCTTTCTGTGCAGCTGGGACTCTCATGTCAGAGTTCCGTGCTTTGCTTTCCCTGAAATCGACCATCTCGGATGACCCTGAAACCTCACTTTCATCATGGAACTCATCTTCAAACAACGGCCATTGCGTTTGGTTGGGGGTCACGTGTGACTATAGGAGGCATGTAATCTCGCTTAACCTGTCAAGTCTCAACCTTTCTGGTACTCTGTCGGCTGACATTGCTCATCTACCCTTTCTGTCAACCCTCTCCTTAGCTTCAAACCAGTTCTCTGGTCCTATTCCTCCTGAGATATCCACACTCTCTGGGTTGCGATATCTCAACCTCTCTAACAATGTCTTCAATGGTACTTTCCCGACAGAGTTGTCCCATCTCAAGAACCTTCAAGTTCTAGACCTGTACAACAATAATATGACCGGAGAGCTTCCCATTGCAGTGACCCAGATGCCAAACCTCCTCCATTTGCATCTGGGTGGAAACTTTTTCTCCGGTCAGATCCCATCGGAGTATGGACAATGGGAAAATATTGAGTATTTGGCAGTCTCAGGTAACGAGCTTGTGGGGACTATACCGCCGGAGATCGGAAACTTGATTACGCTCCGGGAGCTTTACATCGGGTACTTCAACGCCTACGAAGGCGGGATACCGCCAGAGCTTGGTAACTTGTCTTCGTTGGTGAGGTTGGATGCGGCTAACTGTGGCTTGACTGGTGAGATACCACCGGAGCTCGGGAGACTGCGGAATTTGGATACTTTATTTCTTCAAGTGAATGCACTTTCTGGGCCTTTGACAACTGAGCTTGGGACTTTGAAGAGCTTGAAATCTATGGACTTGTCCAACAACATGTTCGTGGGTGAGATTCCAGAGAGTTTTTCACAGCTCAAGAACTTGACCCTTTTGAATCTGTTCAGGAACAAGCTTCATGGAGCTATTCCTGAGTTTATTGGTGAGCTTCCACAGTTGGAGGTATTGCAGCTTTGGGAGAATAACTTCACTGGCAGCATTCCTCCAGGTTTGGGTAGAAATGGTAACCTTCGAATGGTTGATCTGTCTTCAAACAAATTGACTGGAAATCTACCCCCTGATATGTGTTTAGGAAATAAGCTAGAAACTCTGATAACTTTAGGGAATTTCTTGTTTGGCTCTATCCCTGAATCTCTTGGAAAGTGTCAGTCACTTACACGAATTCGGATGGGAGAAAATTTTCTCAATGGGTCTATTCCAAAAGGGTTATTTGGGCTTCCAAAACTGTCTCAAGTTGAATTGCAGGACAACTATCTTCAAGGTGAGTTTCCAAATACTGATAATGGTGCTGTATCTGTTATTCTTGGACAGATTAGTCTGTCTAATAATCAGCTTAGTGGGTCATTGCCGCCAACCATTGGTAATTTTTCTGGAGTTCAGAAGCTCCTTCTTGATGGCAACCAGTTCTCAGGAAGAATACCTGCTGAGATTGGGAAGCTACAGCAGCTTTCAAAGATGGATTTCAGTCATAACAAGTTTTCAGGCCCTATAGCACCTGAGATTAGCCAATGCAAGTTATTGACTTTTGTTGACCTGAGTCGTAACAACTTGTATGGGGAGATTCCTAATGAGATAACCACCATGAGGATATTGAATTACTTGAATCTGTCAAGAAACCACTTAATTGGTAGCATTCCCTCATCAATTTCTTCTATGCAGAGTTTAACATCTGTTGATTTCTCATACAATAATCTCTCTGGTTTGGTGCCTAGTACTGGTCAATTCAGTTATTTTAACTATACATCTTTCCTTGGCAACCCTGATCTTTGTGGCCCGTATTTAGGGCGTTGCAAAGATGGGGTTACTGATGGCTCCCACCAGCCTCATGTTAAAGGTCCTCTTTCCGCTTCCTTCAAGCTGTTGCTTGTCATTGGATTGCTTGTGTGCTCCATTGCATTTGCAGTCGCAGCAATTATTAAAGCACGGTCATTGAAGAAAGCAAGTGATTCTCGTGCTTGGAAATTGACTGCATTCCAGAGGTTAGACTTCACTGTTGATGATGTCTTGGATTGCCTTAAGGAAGACAACATTATTGGTAAAGGAGGTGCAGGCATTGTCTACAAGGGGTCCATACCCAATGGTGACAATGTTGCTGTGAAAAGGTTGCCTGCAATGACCAGGGGTTCCTCTCATGATCATGGATTCAATGCTGAGATTCAGACCTTAGGGAGGATTCGCCACAGGCACATTGTCCGATTGTTAGGATTCTGTTCAAACCATGAGACAAATCTTCTGGTATATGAATACATGCCTAACGGAAGTTTGGGTGAGGTTCTTCATGGTAAGAAAGGGGGTCATTTACACTGGGATACCAGGTACAAGATCGCTGTCGAGTCTGCAAAGGGGCTTTGCTATTTACATCATGACTGTTCCCCGCTGATAGTCCATAGGGATGTGAAGTCTAATAATATCCTTCTTGACTCAAACTTTGAAGCTCATGTTGCTGATTTTGGCCTCGCCAAGTTCCTGCAAGATTCAGGAACATCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATTGCCCCGGAATATGCCTACACACTGAAGGTTGATGAGAAGAGTGATGTTTACAGTTTTGGCGTGGTTCTTTTGGAGTTGATAACTGGCCGGAAGCCCGTTGGTGAATTCGGTGATGGTGTAGATATTGTGCAATGGGTGAGGAAAATGACTGACTCAAACAGAGAGGGAGTTCTTAAGATTCTTGATCCAAGACTTCCCTCCGTTCCCCTTCATGAGGTGATGCATGTTTTCTATGTTGCCATGCTCTGTGTTGAAGAGCAGGCTGTTGAGCGACCAACAATGCGCGAAGTGGTGCAAATTCTGACAGAGCTACCAAAGCCACCGATTTCAAAACAAGGGGACTCAACTGTGACAGAGTCTTGCCCATCACCACCAGATGTATCAGAATCTCCAACCACAACATCGAAAGAACCCAAAGATCACCAGTATCCTCTATCTCAATCAACCCCACCTGATCTTCTTAGTATTTAA 3075 0.4459 MQLPALLSIFLLLVFQPNRSFCAAGTLMSEFRALLSLKSTISDDPETSLSSWNSSSNNGHCVWLGVTCDYRRHVISLNLSSLNLSGTLSADIAHLPFLSTLSLASNQFSGPIPPEISTLSGLRYLNLSNNVFNGTFPTELSHLKNLQVLDLYNNNMTGELPIAVTQMPNLLHLHLGGNFFSGQIPSEYGQWENIEYLAVSGNELVGTIPPEIGNLITLRELYIGYFNAYEGGIPPELGNLSSLVRLDAANCGLTGEIPPELGRLRNLDTLFLQVNALSGPLTTELGTLKSLKSMDLSNNMFVGEIPESFSQLKNLTLLNLFRNKLHGAIPEFIGELPQLEVLQLWENNFTGSIPPGLGRNGNLRMVDLSSNKLTGNLPPDMCLGNKLETLITLGNFLFGSIPESLGKCQSLTRIRMGENFLNGSIPKGLFGLPKLSQVELQDNYLQGEFPNTDNGAVSVILGQISLSNNQLSGSLPPTIGNFSGVQKLLLDGNQFSGRIPAEIGKLQQLSKMDFSHNKFSGPIAPEISQCKLLTFVDLSRNNLYGEIPNEITTMRILNYLNLSRNHLIGSIPSSISSMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFLGNPDLCGPYLGRCKDGVTDGSHQPHVKGPLSASFKLLLVIGLLVCSIAFAVAAIIKARSLKKASDSRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGSIPNGDNVAVKRLPAMTRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVESAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNREGVLKILDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPISKQGDSTVTESCPSPPDVSESPTTTSKEPKDHQYPLSQSTPPDLLSI* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00665 1024 Pfam Leucine Rich repeats (2 copies) 144 184 IPR025875 -
Pte19g00665 1024 Gene3D Ribonuclease Inhibitor 227 314 IPR032675 -
Pte19g00665 1024 Gene3D Ribonuclease Inhibitor 27 226 IPR032675 -
Pte19g00665 1024 MobiDBLite consensus disorder prediction 974 1024 - -
Pte19g00665 1024 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 667 775 - -
Pte19g00665 1024 SMART LRR_typ_2 578 601 IPR003591 -
Pte19g00665 1024 SMART LRR_typ_2 240 264 IPR003591 -
Pte19g00665 1024 SMART LRR_typ_2 95 119 IPR003591 -
Pte19g00665 1024 SMART LRR_typ_2 361 384 IPR003591 -
Pte19g00665 1024 SMART LRR_typ_2 143 167 IPR003591 -
Pte19g00665 1024 SMART LRR_typ_2 288 312 IPR003591 -
Pte19g00665 1024 SMART LRR_typ_2 336 360 IPR003591 -
Pte19g00665 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Pte19g00665 1024 SUPERFAMILY L domain-like 48 354 - -
Pte19g00665 1024 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 340 627 - -
Pte19g00665 1024 SUPERFAMILY L domain-like 305 623 - -
Pte19g00665 1024 Pfam Protein tyrosine and serine/threonine kinase 700 969 IPR001245 GO:0004672|GO:0006468
Pte19g00665 1024 MobiDBLite consensus disorder prediction 977 1024 - -
Pte19g00665 1024 Gene3D Phosphorylase Kinase; domain 1 664 775 - -
Pte19g00665 1024 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 89 332 - -
Pte19g00665 1024 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pte19g00665 1024 Gene3D Ribonuclease Inhibitor 315 629 IPR032675 -
Pte19g00665 1024 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 776 986 - -
Pte19g00665 1024 Gene3D Transferase(Phosphotransferase) domain 1 776 985 - -
Pte19g00665 1024 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 230 971 - -
Pte19g00665 1024 ProSiteProfiles Protein kinase domain profile. 698 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00665 1024 SMART serkin_6 698 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00665 1024 SUPERFAMILY Protein kinase-like (PK-like) 691 969 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00665 Pte-Chr19 5334894 5338510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00665 28 1008 Receptor kinase-like Gene Family AT5G65700 81.744 0.0 1609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte19g00665 PK_Tyr_Ser-Thr 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00665 - - qsa:O6P43_033961 1704.88