Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00664 ATGCTATACCTGATCTTAATTATTTCTTCTCTGTCACTTTTGGTGTTTCAGCAGTATGCAGATGATTATGGCTTTCTGGATGAGGAGCAGCAGATGAACCTGATGAATGAATACTTGGACACGACAAATATTCATCAAGATATAGCCTTGGGATTGCTAGAGGATAACTTCACCAATGGTGAGATCAACTCAACTTACCTTTCCATTCCAGTAAACTTGAGCAGCTCAAGCTTCGAGAGGCCTGCAAAGCAAAGCAAAACATCAGTAAGCAATAATGACCAGATTAGGTCAACAGTCAACAATGAATACGTGGAGATACCTTCAGAAAATCCAGCTCCTTCTCCTTTGTTATCATCAAACGACTCAACACCCTCCAGGCAAGAGGCTGAAAAGCGACAATCAAAATGCCCTAATCGTGGTCAGAGTCATATCATAGCTGAGAGAATGAGAAGGGAAAGACTCACTGAGAGGTTCATTGCTCTCTCAGCTCTCATTCCTGGACTGAAAAAGAATGACAAGGGTTCTGTACTGTGTGAAGCCATTAAGTATGTGAAGCAGCTTCAACAACGAGTGAATTTGCTAGAGGAACAGAACAAGAAATTAAGTGAAGCTCATCCATCAGTTGTCTTCGTCAAGAACTGGAACGAGGTCTCATCCCGTGATGAAGTTGTCTCAAACATCTCATCCAGTTCTGGCACTGTTCATCATGGAAACTCCAACTACGATGCCTCGTACGAGTCACTTCCTGAGGTCGAAGCTAGAGTTTTAGGAAAAGAAGTAATCATTCGAATCCATTGCAGAAAATACAAGGATGTTCTCAAGAATGTACTGAGAGAATTCGAGAATTGTCATCTAGTCGTCGGCAGCAGCAATGTCATACCATTTGGCAACTCCTTTGTGGATATCACCATTGTTGCTCAGATGGAGAAAGAAGACAACATGGTGGTGAATGTTCTTGCCAAAAATCTTGGATTTGCTATTTCAGCAATGGAATGA 996 0.4187 MLYLILIISSLSLLVFQQYADDYGFLDEEQQMNLMNEYLDTTNIHQDIALGLLEDNFTNGEINSTYLSIPVNLSSSSFERPAKQSKTSVSNNDQIRSTVNNEYVEIPSENPAPSPLLSSNDSTPSRQEAEKRQSKCPNRGQSHIIAERMRRERLTERFIALSALIPGLKKNDKGSVLCEAIKYVKQLQQRVNLLEEQNKKLSEAHPSVVFVKNWNEVSSRDEVVSNISSSSGTVHHGNSNYDASYESLPEVEARVLGKEVIIRIHCRKYKDVLKNVLREFENCHLVVGSSNVIPFGNSFVDITIVAQMEKEDNMVVNVLAKNLGFAISAME* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00664 331 PANTHER BHLH TRANSCRIPTION FACTOR 73 327 - -
Pte19g00664 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 209 IPR036638 GO:0046983
Pte19g00664 331 Coils Coil 184 204 - -
Pte19g00664 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Pte19g00664 331 Gene3D - 137 208 IPR036638 GO:0046983
Pte19g00664 331 Pfam Helix-loop-helix DNA-binding domain 141 188 IPR011598 GO:0046983
Pte19g00664 331 SMART finulus 144 193 IPR011598 GO:0046983
Pte19g00664 331 MobiDBLite consensus disorder prediction 104 124 - -
Pte19g00664 331 MobiDBLite consensus disorder prediction 104 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00664 Pte-Chr19 5330277 5332199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00664 140 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.386 1.32e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte19g00664 HLH 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00664 - - tpra:123911002 187.193